Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH6P55285 AL352979.3-201ENST00000553515 247 ntBASIC4.53□□□□□ -1.68
CDH6P55285 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH6P55285 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH6P55285 RPL12P25-202ENST00000598100 674 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC104785.1-201ENST00000603220 588 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC034236.3-201ENST00000605999 461 ntBASIC4.53□□□□□ -1.68
CDH6P55285 RN7SL722P-201ENST00000617780 284 ntBASIC4.53□□□□□ -1.68
CDH6P55285 RN7SL565P-201ENST00000618246 284 ntBASIC4.53□□□□□ -1.68
CDH6P55285 RMST_5.1-201ENST00000618704 126 ntBASIC4.53□□□□□ -1.68
CDH6P55285 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 SYT14P1-202ENST00000600441 1448 ntBASIC4.53□□□□□ -1.68
CDH6P55285 AC090971.4-201ENST00000560291 1800 ntBASIC4.53□□□□□ -1.68
CDH6P55285 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH6P55285 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CDH6P55285 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH6P55285 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
CDH6P55285 CNOT7P1-201ENST00000429006 852 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH6P55285 RPL12P28-201ENST00000430852 489 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AL392003.1-201ENST00000434394 243 ntBASIC4.52□□□□□ -1.69
CDH6P55285 FHP1-201ENST00000442741 703 ntBASIC4.52□□□□□ -1.69
CDH6P55285 CCRL1P1-201ENST00000449542 1053 ntBASIC4.52□□□□□ -1.69
CDH6P55285 NDUFA12P1-201ENST00000455914 406 ntBASIC4.52□□□□□ -1.69
CDH6P55285 RPL7P22-201ENST00000466005 733 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 MTCYBP19-201ENST00000517463 1124 ntBASIC4.52□□□□□ -1.69
CDH6P55285 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 PHBP17-201ENST00000528576 541 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH6P55285 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 AC087888.1-201ENST00000550884 1254 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH6P55285 AL590410.1-201ENST00000617925 333 ntBASIC4.52□□□□□ -1.69
CDH6P55285 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AC019278.1-201ENST00000623516 479 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AL137100.1-201ENST00000556703 1620 ntBASIC4.52□□□□□ -1.69
CDH6P55285 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH6P55285 Z98755.1-201ENST00000407015 1384 ntBASIC4.52□□□□□ -1.69
CDH6P55285 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH6P55285 AC074029.4-201ENST00000624796 1859 ntBASIC4.52□□□□□ -1.69
CDH6P55285 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH6P55285 AC025031.4-201ENST00000621248 3271 ntBASIC4.51□□□□□ -1.69
CDH6P55285 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDH6P55285 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 OR5P1P-201ENST00000299512 925 ntBASIC4.51□□□□□ -1.69
CDH6P55285 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CDH6P55285 MT-TP-201ENST00000387461 68 ntBASIC4.51□□□□□ -1.69
CDH6P55285 SNORD66.1-201ENST00000391230 76 ntBASIC4.51□□□□□ -1.69
CDH6P55285 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 RPL23AP59-201ENST00000399415 461 ntBASIC4.51□□□□□ -1.69
CDH6P55285 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.51□□□□□ -1.69
CDH6P55285 GAPDHP49-201ENST00000421421 961 ntBASIC4.51□□□□□ -1.69
CDH6P55285 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH6P55285 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.51□□□□□ -1.69
CDH6P55285 ABCF2P2-201ENST00000450549 296 ntBASIC4.51□□□□□ -1.69
CDH6P55285 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 MTND2P28-201ENST00000457540 1044 ntBASIC4.51□□□□□ -1.69
CDH6P55285 RPS26P28-201ENST00000470806 348 ntBASIC4.51□□□□□ -1.69
CDH6P55285 NDUFB4P12-201ENST00000513465 390 ntBASIC4.51□□□□□ -1.69
CDH6P55285 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.51□□□□□ -1.69
CDH6P55285 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH6P55285 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH6P55285 AL121834.1-201ENST00000572284 509 ntBASIC4.51□□□□□ -1.69
CDH6P55285 MIR4330-201ENST00000579077 105 ntBASIC4.51□□□□□ -1.69
CDH6P55285 AL021997.2-201ENST00000615674 271 ntBASIC4.51□□□□□ -1.69
CDH6P55285 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH6P55285 MIR7154-201ENST00000620673 73 ntBASIC4.51□□□□□ -1.69
CDH6P55285 AP000346.3-201ENST00000622821 210 ntBASIC4.51□□□□□ -1.69
CDH6P55285 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH6P55285 MAPK10-304ENST00000641341 3984 ntBASIC4.51□□□□□ -1.69
CDH6P55285 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH6P55285 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH6P55285 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH6P55285 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH6P55285 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
CDH6P55285 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms