Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 GVINP1-202ENST00000531871 7271 ntBASIC5.87□□□□□ -1.47
CLTCL1P53675 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLTCL1P53675 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 AL161631.1-201ENST00000417933 486 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 AC117434.1-201ENST00000419971 836 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 CYCSP43-201ENST00000438233 310 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.86□□□□□ -1.47
CLTCL1P53675 BTG4P1-201ENST00000510421 183 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 SCARNA14-201ENST00000516903 136 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 AC026403.1-201ENST00000518938 295 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 AC087369.1-201ENST00000520775 996 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.86□□□□□ -1.47
CLTCL1P53675 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 QTRT1P1-201ENST00000604344 1078 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 AP001273.1-201ENST00000624493 3152 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 AC126323.6-202ENST00000568092 3511 ntBASIC5.86□□□□□ -1.47
CLTCL1P53675 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLTCL1P53675 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CLTCL1P53675 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AC067945.1-201ENST00000342609 618 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 RNA5SP387-201ENST00000364226 106 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 RNU6-761P-201ENST00000384148 107 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AC100770.1-201ENST00000532310 322 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.85□□□□□ -1.47
CLTCL1P53675 HSPE1P5-201ENST00000561489 272 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 AC008759.1-201ENST00000589783 983 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 AC023509.5-201ENST00000617434 807 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 MIR6075-201ENST00000620782 95 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.85□□□□□ -1.47
CLTCL1P53675 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AC023632.6-201ENST00000624338 2177 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.85□□□□□ -1.47
CLTCL1P53675 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.85□□□□□ -1.47
CLTCL1P53675 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 HMGB3P19-201ENST00000403971 560 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.85□□□□□ -1.47
CLTCL1P53675 TCEA1P4-201ENST00000415066 844 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 OR4F13P-201ENST00000428478 931 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.85□□□□□ -1.47
CLTCL1P53675 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.85□□□□□ -1.47
CLTCL1P53675 AC015922.4-201ENST00000612568 690 ntBASIC5.85□□□□□ -1.47
CLTCL1P53675 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLTCL1P53675 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLTCL1P53675 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLTCL1P53675 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLTCL1P53675 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 GOT2P5-201ENST00000433995 546 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC083863.1-201ENST00000438811 231 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLTCL1P53675 AL157884.3-201ENST00000448273 1184 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 RN7SKP46-201ENST00000515942 234 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.84□□□□□ -1.47
CLTCL1P53675 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.84□□□□□ -1.47
CLTCL1P53675 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.84□□□□□ -1.47
CLTCL1P53675 SLC25A36P1-201ENST00000590111 465 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC008739.3-201ENST00000603262 127 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.84□□□□□ -1.47
CLTCL1P53675 AL354798.1-201ENST00000622505 329 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC073530.2-201ENST00000623987 261 ntBASIC5.84□□□□□ -1.47
CLTCL1P53675 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.84□□□□□ -1.47
CLTCL1P53675 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.84□□□□□ -1.47
CLTCL1P53675 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CLTCL1P53675 AC021242.1-201ENST00000507315 2035 ntBASIC5.83□□□□□ -1.48
CLTCL1P53675 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLTCL1P53675 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.83□□□□□ -1.48
CLTCL1P53675 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLTCL1P53675 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.83□□□□□ -1.48
CLTCL1P53675 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.83□□□□□ -1.48
CLTCL1P53675 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLTCL1P53675 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLTCL1P53675 SNORA60-201ENST00000362396 134 ntBASIC5.83□□□□□ -1.48
CLTCL1P53675 RN7SKP156-201ENST00000410308 342 ntBASIC5.83□□□□□ -1.48
CLTCL1P53675 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.83□□□□□ -1.48
CLTCL1P53675 RPL7L1P8-201ENST00000469911 741 ntBASIC5.83□□□□□ -1.48
CLTCL1P53675 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CLTCL1P53675 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CLTCL1P53675 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.83□□□□□ -1.48
CLTCL1P53675 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.83□□□□□ -1.48
CLTCL1P53675 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.83□□□□□ -1.48
CLTCL1P53675 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.83□□□□□ -1.48
CLTCL1P53675 CR392039.5-201ENST00000623201 510 ntBASIC5.83□□□□□ -1.48
CLTCL1P53675 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms