Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.84□□□□□ -1.63
ACLYP53396 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.84□□□□□ -1.63
ACLYP53396 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.84□□□□□ -1.63
ACLYP53396 RPL7P50-201ENST00000600588 727 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AL354984.3-201ENST00000604803 325 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AL137246.1-201ENST00000607072 977 ntBASIC4.84□□□□□ -1.63
ACLYP53396 RNU4-89P-201ENST00000607443 133 ntBASIC4.84□□□□□ -1.63
ACLYP53396 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 MIR6075-201ENST00000620782 95 ntBASIC4.84□□□□□ -1.63
ACLYP53396 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
ACLYP53396 AC107068.1-201ENST00000563286 4218 ntBASIC4.84□□□□□ -1.64
ACLYP53396 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ACLYP53396 AC093849.1-201ENST00000563631 2209 ntBASIC4.84□□□□□ -1.64
ACLYP53396 AL133243.3-201ENST00000617415 3004 ntBASIC4.83□□□□□ -1.64
ACLYP53396 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ACLYP53396 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ACLYP53396 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ACLYP53396 OR56B2P-201ENST00000317102 954 ntBASIC4.83□□□□□ -1.64
ACLYP53396 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 RPL21P65-201ENST00000406094 466 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AC002524.1-201ENST00000411687 547 ntBASIC4.83□□□□□ -1.64
ACLYP53396 RPS20P14-201ENST00000412545 360 ntBASIC4.83□□□□□ -1.64
ACLYP53396 HMGB3P5-201ENST00000428894 612 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AL138787.1-202ENST00000437804 898 ntBASIC4.83□□□□□ -1.64
ACLYP53396 RPS29P7-201ENST00000439662 171 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AC107015.1-201ENST00000466902 747 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AC010374.1-201ENST00000503762 1237 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AL592156.1-201ENST00000508758 304 ntBASIC4.83□□□□□ -1.64
ACLYP53396 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 NPM1P41-201ENST00000512920 831 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.83□□□□□ -1.64
ACLYP53396 RN7SL703P-201ENST00000578485 302 ntBASIC4.83□□□□□ -1.64
ACLYP53396 AC130352.1-201ENST00000602979 661 ntBASIC4.83□□□□□ -1.64
ACLYP53396 FAM27D1-201ENST00000612308 341 ntBASIC4.83□□□□□ -1.64
ACLYP53396 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ACLYP53396 AL445363.3-201ENST00000623080 671 ntBASIC4.83□□□□□ -1.64
ACLYP53396 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ACLYP53396 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ACLYP53396 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.83□□□□□ -1.64
ACLYP53396 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
ACLYP53396 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
ACLYP53396 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
ACLYP53396 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 NXPH1-205ENST00000602349 1953 ntBASIC4.82□□□□□ -1.64
ACLYP53396 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.82□□□□□ -1.64
ACLYP53396 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ACLYP53396 RNA5SP175-201ENST00000364275 119 ntBASIC4.82□□□□□ -1.64
ACLYP53396 SNORA70.4-201ENST00000365509 134 ntBASIC4.82□□□□□ -1.64
ACLYP53396 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ACLYP53396 EI24P3-201ENST00000399046 1062 ntBASIC4.82□□□□□ -1.64
ACLYP53396 RN7SKP97-201ENST00000410966 333 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.82□□□□□ -1.64
ACLYP53396 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
ACLYP53396 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 AC146944.2-203ENST00000502493 354 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AK4P6-201ENST00000505168 528 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 AC139495.1-202ENST00000513164 354 ntBASIC4.82□□□□□ -1.64
ACLYP53396 RNU4-18P-201ENST00000516751 149 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.82□□□□□ -1.64
ACLYP53396 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.82□□□□□ -1.64
ACLYP53396 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.82□□□□□ -1.64
ACLYP53396 AC090181.2-201ENST00000602975 672 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AC024220.1-201ENST00000603675 484 ntBASIC4.82□□□□□ -1.64
ACLYP53396 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
ACLYP53396 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.82□□□□□ -1.64
ACLYP53396 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ACLYP53396 AC107021.2-201ENST00000567714 2095 ntBASIC4.82□□□□□ -1.64
ACLYP53396 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 SCN1A-220ENST00000641603 12506 ntBASIC4.82□□□□□ -1.64
ACLYP53396 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACLYP53396 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms