Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
RORAP35398 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 CYP1D1P-201ENST00000416662 1433 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
RORAP35398 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.38□□□□□ -1.71
RORAP35398 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RORAP35398 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
RORAP35398 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 AC007342.7-201ENST00000624610 2337 ntBASIC4.37□□□□□ -1.71
RORAP35398 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.37□□□□□ -1.71
RORAP35398 IGKV7-3-201ENST00000357453 298 ntBASIC4.37□□□□□ -1.71
RORAP35398 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.37□□□□□ -1.71
RORAP35398 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 AL080315.1-201ENST00000406055 466 ntBASIC4.37□□□□□ -1.71
RORAP35398 AC009237.10-201ENST00000414112 510 ntBASIC4.37□□□□□ -1.71
RORAP35398 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 CHIAP3-201ENST00000423668 1133 ntBASIC4.37□□□□□ -1.71
RORAP35398 EIF2S2P3-201ENST00000428356 999 ntBASIC4.37□□□□□ -1.71
RORAP35398 AC023141.6-201ENST00000429418 337 ntBASIC4.37□□□□□ -1.71
RORAP35398 RPL21P133-201ENST00000443666 476 ntBASIC4.37□□□□□ -1.71
RORAP35398 Z95152.1-201ENST00000453556 656 ntBASIC4.37□□□□□ -1.71
RORAP35398 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.37□□□□□ -1.71
RORAP35398 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.37□□□□□ -1.71
RORAP35398 PRELID3BP5-201ENST00000508612 460 ntBASIC4.37□□□□□ -1.71
RORAP35398 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.37□□□□□ -1.71
RORAP35398 AC087888.1-201ENST00000550884 1254 ntBASIC4.37□□□□□ -1.71
RORAP35398 AL445423.1-201ENST00000609941 536 ntBASIC4.37□□□□□ -1.71
RORAP35398 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RORAP35398 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.37□□□□□ -1.71
RORAP35398 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.37□□□□□ -1.71
RORAP35398 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 AC108467.2-201ENST00000617640 1597 ntBASIC4.36□□□□□ -1.71
RORAP35398 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.36□□□□□ -1.71
RORAP35398 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
RORAP35398 FAM3C2-201ENST00000312214 681 ntBASIC4.36□□□□□ -1.71
RORAP35398 OR1F12-201ENST00000402365 945 ntBASIC4.36□□□□□ -1.71
RORAP35398 AL034374.1-201ENST00000406329 351 ntBASIC4.36□□□□□ -1.71
RORAP35398 AL139039.2-201ENST00000407436 479 ntBASIC4.36□□□□□ -1.71
RORAP35398 RNU4-25P-201ENST00000410569 230 ntBASIC4.36□□□□□ -1.71
RORAP35398 ARAFP1-201ENST00000422172 605 ntBASIC4.36□□□□□ -1.71
RORAP35398 NDUFA5P1-201ENST00000433858 341 ntBASIC4.36□□□□□ -1.71
RORAP35398 CACYBPP1-201ENST00000438592 684 ntBASIC4.36□□□□□ -1.71
RORAP35398 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.36□□□□□ -1.71
RORAP35398 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 METTL15P1-201ENST00000481421 1045 ntBASIC4.36□□□□□ -1.71
RORAP35398 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RORAP35398 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.36□□□□□ -1.71
RORAP35398 SMARCE1P4-201ENST00000523647 241 ntBASIC4.36□□□□□ -1.71
RORAP35398 AP000827.1-201ENST00000527814 258 ntBASIC4.36□□□□□ -1.71
RORAP35398 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.36□□□□□ -1.71
RORAP35398 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.36□□□□□ -1.71
RORAP35398 AC145207.9-201ENST00000623802 325 ntBASIC4.36□□□□□ -1.71
RORAP35398 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RORAP35398 AC067931.1-201ENST00000624190 671 ntBASIC4.36□□□□□ -1.71
RORAP35398 AC108751.5-201ENST00000492880 1336 ntBASIC4.36□□□□□ -1.71
RORAP35398 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 KPNA2P2-201ENST00000419546 1489 ntBASIC4.36□□□□□ -1.71
RORAP35398 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RORAP35398 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RORAP35398 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
RORAP35398 MIR659-201ENST00000384963 97 ntBASIC4.35□□□□□ -1.71
RORAP35398 AL034403.1-201ENST00000399414 885 ntBASIC4.35□□□□□ -1.71
RORAP35398 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 MTCYBP7-201ENST00000419540 1134 ntBASIC4.35□□□□□ -1.71
RORAP35398 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 GAPDHP49-201ENST00000421421 961 ntBASIC4.35□□□□□ -1.71
RORAP35398 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 RPS26P4-201ENST00000431743 355 ntBASIC4.35□□□□□ -1.71
RORAP35398 AC073143.1-201ENST00000436316 395 ntBASIC4.35□□□□□ -1.71
RORAP35398 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 AC005008.1-201ENST00000456151 612 ntBASIC4.35□□□□□ -1.71
RORAP35398 AC093267.1-201ENST00000489176 961 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms