Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 USP9YP12-201ENST00000450481 570 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 snoU109.1-201ENST00000459339 135 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 RPL31P58-201ENST00000469001 379 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC026254.2-201ENST00000475295 371 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC005912.1-201ENST00000495392 255 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC063943.2-201ENST00000495697 534 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 H3F3AP3-201ENST00000497682 407 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC104109.1-201ENST00000498563 436 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 PRDX4P1-201ENST00000507189 574 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC022483.1-201ENST00000514020 567 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 ARL2BPP5-201ENST00000523141 481 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 OR5M7P-201ENST00000526140 972 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 AP005205.1-201ENST00000563503 508 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC011451.2-201ENST00000604303 598 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC010857.1-201ENST00000606398 594 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 SNORA74.4-201ENST00000607595 199 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC131902.3-201ENST00000611767 581 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC243654.2-201ENST00000612843 443 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AL138960.1-201ENST00000613838 513 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC008250.2-201ENST00000615261 205 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC007014.2-201ENST00000615581 479 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 MIR6811-201ENST00000620409 58 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AP001264.1-201ENST00000620602 703 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 CR381653.2-201ENST00000624041 768 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AL157786.1-207ENST00000627771 695 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC073488.9-201ENST00000631601 754 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 LINC00561-201ENST00000565815 2738 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 AC079753.1-201ENST00000623243 3868 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC12P31275 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC12P31275 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC12P31275 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AL161756.3-201ENST00000641216 2071 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 AP002370.1-201ENST00000528055 1602 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 LCN1P2-201ENST00000372030 223 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 MIR181A1-201ENST00000385026 110 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 RNU1-149P-201ENST00000390870 161 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 GCNT1P4-201ENST00000404096 329 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AL390316.1-201ENST00000406279 553 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AL023284.3-201ENST00000407767 334 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC245052.5-201ENST00000416320 649 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 GNG5P5-201ENST00000420444 220 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC007742.1-201ENST00000425789 329 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC12P31275 ELOCP26-201ENST00000436067 329 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 SETP20-201ENST00000457046 852 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 RN7SL254P-201ENST00000460609 284 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC109462.1-201ENST00000491087 368 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC12P31275 MTND4LP18-201ENST00000526864 291 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AP004247.1-201ENST00000531556 1289 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC12P31275 AC124947.2-202ENST00000552735 133 ntBASIC5.68□□□□□ -1.5
HOXC12P31275 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXC12P31275 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC12P31275 AC026956.1-201ENST00000558741 396 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms