Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A5P29400 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC090286.3-201ENST00000573133 187 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A5P29400 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A5P29400 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC008833.1-201ENST00000611633 691 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A5P29400 AC007342.8-201ENST00000623278 678 ntBASIC4.89□□□□□ -1.63
COL4A5P29400 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL4A5P29400 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A5P29400 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A5P29400 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A5P29400 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A5P29400 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A5P29400 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A5P29400 AC074250.1-201ENST00000511117 192 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 RNA5SP179-201ENST00000517284 121 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 AC016957.2-201ENST00000616998 848 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 AL645927.2-201ENST00000618350 349 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A5P29400 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL4A5P29400 A2MP1-204ENST00000566278 4130 ntBASIC4.88□□□□□ -1.63
COL4A5P29400 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A5P29400 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 AC009506.2-201ENST00000420635 840 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 RPL23AP25-201ENST00000430973 463 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A5P29400 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A5P29400 RPS27AP15-201ENST00000447672 466 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 UBE2CP3-201ENST00000502715 450 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 AC104619.4-201ENST00000510773 249 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.87□□□□□ -1.63
COL4A5P29400 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL4A5P29400 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL4A5P29400 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 AC073346.2-201ENST00000624724 2058 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 AL138820.1-201ENST00000617901 5305 ntBASIC4.87□□□□□ -1.63
COL4A5P29400 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
COL4A5P29400 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A5P29400 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A5P29400 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL4A5P29400 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 NDUFB4P4-201ENST00000404822 243 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A5P29400 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A5P29400 GTF3AP5-201ENST00000442645 697 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AC104978.1-201ENST00000449387 391 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 HMGN1P15-201ENST00000513870 295 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AC087369.1-201ENST00000520775 996 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AP001153.1-201ENST00000641024 338 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 AL133268.1-201ENST00000405676 1401 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A5P29400 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A5P29400 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 EOGT-210ENST00000615922 1931 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 MIR34B-201ENST00000385076 84 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 EIF4A1P1-201ENST00000420241 934 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A5P29400 PDSS1P2-201ENST00000449397 678 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A5P29400 AC008155.2-201ENST00000464337 397 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A5P29400 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 AC037471.2-201ENST00000564941 598 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms