Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL5A1P20908 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.11□□□□□ -1.75
COL5A1P20908 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL5A1P20908 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 RNU1-44P-201ENST00000384453 163 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 AC068533.1-201ENST00000418542 415 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 EIF1P3-201ENST00000423841 334 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 OR8F1P-201ENST00000425243 930 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.1□□□□□ -1.75
COL5A1P20908 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
COL5A1P20908 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 RPL36AP13-201ENST00000457490 317 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 AC090589.1-201ENST00000473109 362 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 AC017007.3-201ENST00000479865 435 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 RNA5SP497-201ENST00000516081 97 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 IFITM8P-201ENST00000522529 394 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 PCA3_2.1-201ENST00000612507 409 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.1□□□□□ -1.75
COL5A1P20908 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.1□□□□□ -1.75
COL5A1P20908 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.1□□□□□ -1.75
COL5A1P20908 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL5A1P20908 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL5A1P20908 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.09□□□□□ -1.75
COL5A1P20908 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL5A1P20908 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 AL080315.1-201ENST00000406055 466 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 PDSS1P1-201ENST00000422953 1114 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 PRELID3BP10-201ENST00000431957 584 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A1P20908 PPIAP13-201ENST00000434706 478 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 RPS27AP15-201ENST00000447672 466 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.09□□□□□ -1.75
COL5A1P20908 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.09□□□□□ -1.75
COL5A1P20908 RN7SKP157-201ENST00000516174 282 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A1P20908 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.09□□□□□ -1.75
COL5A1P20908 SLC25A36P1-201ENST00000590111 465 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A1P20908 AC015922.4-201ENST00000612568 690 ntBASIC4.09□□□□□ -1.75
COL5A1P20908 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.09□□□□□ -1.75
COL5A1P20908 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
COL5A1P20908 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
COL5A1P20908 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.09□□□□□ -1.75
COL5A1P20908 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL5A1P20908 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
COL5A1P20908 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL5A1P20908 MIR7-3-201ENST00000384898 110 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 BOLA3P4-201ENST00000418151 400 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 AL121878.1-201ENST00000418638 859 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.09□□□□□ -1.76
COL5A1P20908 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.09□□□□□ -1.76
COL5A1P20908 CEACAMP1-201ENST00000434624 1035 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 CYCSP43-201ENST00000438233 310 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 AF213884.1-201ENST00000488102 463 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.09□□□□□ -1.76
COL5A1P20908 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.09□□□□□ -1.76
COL5A1P20908 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.09□□□□□ -1.76
COL5A1P20908 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.09□□□□□ -1.76
COL5A1P20908 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.76
COL5A1P20908 AC107982.3-201ENST00000584957 985 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.09□□□□□ -1.76
COL5A1P20908 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.09□□□□□ -1.76
COL5A1P20908 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.09□□□□□ -1.76
COL5A1P20908 SNORD91B-202ENST00000608459 222 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 AL021997.2-201ENST00000615674 271 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 AC005086.4-201ENST00000623065 213 ntBASIC4.09□□□□□ -1.76
COL5A1P20908 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.76
COL5A1P20908 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL5A1P20908 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.08□□□□□ -1.76
COL5A1P20908 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
COL5A1P20908 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms