Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.89□□□□□ -1.31
ERCC3P19447 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC3P19447 SLC31A1P1-201ENST00000451221 567 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 HMGN3P1-201ENST00000453847 193 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 RPL10P17-201ENST00000453852 316 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC103563.5-201ENST00000455643 364 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 RPL21P71-201ENST00000465598 459 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC010301.1-201ENST00000473936 355 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 GAPDHP62-201ENST00000515313 990 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC022447.1-201ENST00000515358 464 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC3P19447 GTF2IP22-201ENST00000554443 182 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC078795.2-201ENST00000602835 1252 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC068276.1-201ENST00000605793 379 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 AL122125.1-201ENST00000616999 600 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 HSPD1P8-201ENST00000400121 1658 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 AC093775.1-201ENST00000624154 1868 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AC140134.1-201ENST00000511830 3544 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AL034546.1-201ENST00000623740 3693 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
ERCC3P19447 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
ERCC3P19447 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ERCC3P19447 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 AOX3P-204ENST00000491025 2107 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 PABPC1P9-201ENST00000426076 1612 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 PDZK1P1-202ENST00000425209 1350 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 RNU6-657P-201ENST00000383904 107 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AC016739.1-201ENST00000405359 345 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 NCSTNP1-201ENST00000406229 144 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.88□□□□□ -1.31
ERCC3P19447 MTCYBP38-201ENST00000417160 1123 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ERCC3P19447 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 BRWD1P3-201ENST00000428816 390 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 VDAC1P6-201ENST00000430062 855 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 YWHAZP8-201ENST00000436935 731 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AC092427.1-201ENST00000439177 601 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 ELOCP10-201ENST00000440624 327 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 TCEA1P3-201ENST00000443005 880 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 COX6CP12-201ENST00000446748 202 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 MTND1P27-201ENST00000451117 902 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 RPS27AP3-201ENST00000453803 454 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.88□□□□□ -1.31
ERCC3P19447 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 AC026412.2-201ENST00000512270 1075 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.88□□□□□ -1.31
ERCC3P19447 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 AC051619.2-201ENST00000559063 397 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 NMNAT1P5-201ENST00000559657 841 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC3P19447 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.88□□□□□ -1.31
ERCC3P19447 AC020914.6-201ENST00000594327 272 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AL589674.2-201ENST00000604304 337 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 ELOCP34-201ENST00000604436 327 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 HSPE1P14-201ENST00000605812 302 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.88□□□□□ -1.31
ERCC3P19447 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC3P19447 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ERCC3P19447 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC3P19447 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 AC097461.1-201ENST00000568928 2821 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC019072.1-201ENST00000604535 1551 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AL158152.1-201ENST00000602652 1435 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ERCC3P19447 Y_RNA.359-201ENST00000365498 102 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms