Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC020914.6-201ENST00000594327 272 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.76□□□□□ -1.49
COL6A2P12110 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL6A2P12110 AL136131.3-201ENST00000607600 188 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AP001596.2-201ENST00000608410 312 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC234782.5-201ENST00000617723 324 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 AC016717.3-201ENST00000624730 554 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.76□□□□□ -1.49
COL6A2P12110 MKKS-204ENST00000639674 192 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.76□□□□□ -1.49
COL6A2P12110 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COL6A2P12110 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL6A2P12110 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 CASC19-284ENST00000642142 1868 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 FGF7P2-201ENST00000332473 296 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 RN7SKP185-201ENST00000362813 326 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 RN7SKP250-201ENST00000363924 321 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 SUGT1P1-201ENST00000379514 476 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL6A2P12110 AL590290.1-201ENST00000405336 380 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 MTCO3P31-201ENST00000405526 789 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AL136131.1-201ENST00000406079 803 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 RPS27AP7-201ENST00000422792 455 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 RPL7P4-203ENST00000430239 730 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 NPM1P18-201ENST00000434232 732 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 AL353572.1-201ENST00000442490 417 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 COX6CP12-201ENST00000446748 202 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 RN7SL254P-201ENST00000460609 284 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC126182.1-201ENST00000478134 357 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AL161747.1-201ENST00000480068 358 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC099521.1-201ENST00000482557 334 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 RPS27P20-201ENST00000492051 246 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 SETP14-201ENST00000497538 873 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 MAST4-IT1-201ENST00000514241 658 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 RN7SKP70-201ENST00000516655 271 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.75□□□□□ -1.49
COL6A2P12110 AP003392.2-201ENST00000527269 208 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL6A2P12110 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 AL133241.1-201ENST00000556832 487 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC091078.2-201ENST00000557145 559 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 AC092332.1-201ENST00000563684 829 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 AL078601.3-201ENST00000573303 535 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 RN7SL230P-201ENST00000580835 303 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC068768.2-201ENST00000602352 343 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.75□□□□□ -1.49
COL6A2P12110 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 AC013476.2-201ENST00000614456 459 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC018926.3-201ENST00000618841 406 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 AC019226.1-201ENST00000625666 515 ntBASIC5.75□□□□□ -1.49
COL6A2P12110 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.75□□□□□ -1.49
COL6A2P12110 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.75□□□□□ -1.49
COL6A2P12110 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL6A2P12110 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL6A2P12110 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL6A2P12110 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 AC093225.1-201ENST00000506867 1408 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 AP004607.3-201ENST00000530354 3915 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 HSPA8P14-201ENST00000552265 1805 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL6A2P12110 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.74□□□□□ -1.49
COL6A2P12110 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL6A2P12110 RNU6-1283P-201ENST00000365314 105 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 RNU6-1042P-201ENST00000384204 107 ntBASIC5.74□□□□□ -1.49
COL6A2P12110 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms