Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.69□□□□□ -1.66
COL11A1P12107 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 MIR7702-201ENST00000621931 59 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.69□□□□□ -1.66
COL11A1P12107 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.68□□□□□ -1.66
COL11A1P12107 RNU6-213P-201ENST00000384051 104 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.68□□□□□ -1.66
COL11A1P12107 AL161631.1-201ENST00000417933 486 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.68□□□□□ -1.66
COL11A1P12107 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 AC104306.1-201ENST00000449702 371 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 AC091564.1-201ENST00000464563 479 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 RPL7P1-201ENST00000468161 747 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 RPL7P9-201ENST00000468715 747 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 AC006517.1-201ENST00000480485 328 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 BNIP3P41-201ENST00000503774 571 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.68□□□□□ -1.66
COL11A1P12107 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.68□□□□□ -1.66
COL11A1P12107 MIR432-201ENST00000606207 94 ntBASIC4.68□□□□□ -1.66
COL11A1P12107 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL11A1P12107 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.68□□□□□ -1.66
COL11A1P12107 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL11A1P12107 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL11A1P12107 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.68□□□□□ -1.66
COL11A1P12107 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.68□□□□□ -1.66
COL11A1P12107 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 MIR195-201ENST00000385194 87 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.67□□□□□ -1.66
COL11A1P12107 SKP1P3-201ENST00000429280 487 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 RPL29P14-201ENST00000495837 428 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 SNORA67.7-201ENST00000516664 135 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC091516.1-201ENST00000549191 703 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC084757.4-201ENST00000616350 526 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.67□□□□□ -1.66
COL11A1P12107 AL121878.1-201ENST00000418638 859 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AL139247.1-201ENST00000422768 325 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.67□□□□□ -1.66
COL11A1P12107 AC073335.1-201ENST00000427776 363 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 PRSS3P4-201ENST00000453323 162 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AC006499.6-201ENST00000511169 607 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AC008759.1-201ENST00000589783 983 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 FP236240.3-201ENST00000623061 327 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AP003400.2-201ENST00000624036 666 ntBASIC4.67□□□□□ -1.66
COL11A1P12107 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL11A1P12107 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL11A1P12107 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 FAM91A3P-201ENST00000456826 2544 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL11A1P12107 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL11A1P12107 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 AC016588.2-201ENST00000632484 3021 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 RNA5SP513-201ENST00000364648 118 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 RNA5SP97-201ENST00000365006 84 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 OR4F13P-201ENST00000428478 931 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.66□□□□□ -1.66
COL11A1P12107 RAD23BP3-201ENST00000454157 1152 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 PPIAP15-201ENST00000479662 484 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 RPS3AP6-201ENST00000484430 795 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.66□□□□□ -1.66
COL11A1P12107 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.66□□□□□ -1.66
COL11A1P12107 MIR5685-201ENST00000579080 79 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AC017100.2-201ENST00000584628 355 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AL592436.1-201ENST00000605135 558 ntBASIC4.66□□□□□ -1.66
COL11A1P12107 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.66□□□□□ -1.66
COL11A1P12107 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.66□□□□□ -1.66
COL11A1P12107 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.66□□□□□ -1.66
COL11A1P12107 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms