Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.89□□□□□ -1.63
PCNAP12004 AC006518.2-201ENST00000542513 940 ntBASIC4.89□□□□□ -1.63
PCNAP12004 AL132857.1-201ENST00000555180 708 ntBASIC4.89□□□□□ -1.63
PCNAP12004 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.89□□□□□ -1.63
PCNAP12004 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.89□□□□□ -1.63
PCNAP12004 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.89□□□□□ -1.63
PCNAP12004 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.89□□□□□ -1.63
PCNAP12004 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.89□□□□□ -1.63
PCNAP12004 MIR4489-201ENST00000578869 62 ntBASIC4.89□□□□□ -1.63
PCNAP12004 AC011840.5-201ENST00000582125 771 ntBASIC4.89□□□□□ -1.63
PCNAP12004 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.89□□□□□ -1.63
PCNAP12004 AP005432.2-201ENST00000608162 586 ntBASIC4.89□□□□□ -1.63
PCNAP12004 BX005214.3-202ENST00000619809 325 ntBASIC4.89□□□□□ -1.63
PCNAP12004 AC104985.3-201ENST00000623479 597 ntBASIC4.89□□□□□ -1.63
PCNAP12004 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.89□□□□□ -1.63
PCNAP12004 LINC01808-202ENST00000641680 1116 ntBASIC4.89□□□□□ -1.63
PCNAP12004 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.89□□□□□ -1.63
PCNAP12004 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCNAP12004 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
PCNAP12004 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCNAP12004 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCNAP12004 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PCNAP12004 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.89□□□□□ -1.63
PCNAP12004 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCNAP12004 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCNAP12004 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCNAP12004 MTCO1P11-201ENST00000429111 1528 ntBASIC4.88□□□□□ -1.63
PCNAP12004 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCNAP12004 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCNAP12004 AL035419.1-201ENST00000397037 564 ntBASIC4.88□□□□□ -1.63
PCNAP12004 RPL23AP59-201ENST00000399415 461 ntBASIC4.88□□□□□ -1.63
PCNAP12004 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.88□□□□□ -1.63
PCNAP12004 AP002530.1-201ENST00000405705 684 ntBASIC4.88□□□□□ -1.63
PCNAP12004 OR51B3P-201ENST00000412287 913 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC007738.1-201ENST00000413892 348 ntBASIC4.88□□□□□ -1.63
PCNAP12004 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 YWHAEP5-201ENST00000431545 765 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 RPL7P29-201ENST00000437151 728 ntBASIC4.88□□□□□ -1.63
PCNAP12004 OR10R1P-201ENST00000441524 1141 ntBASIC4.88□□□□□ -1.63
PCNAP12004 RPS26P30-201ENST00000443431 335 ntBASIC4.88□□□□□ -1.63
PCNAP12004 GEMIN8P3-201ENST00000445417 720 ntBASIC4.88□□□□□ -1.63
PCNAP12004 SEPT14P24-201ENST00000447236 180 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 RPL7AP52-201ENST00000458096 790 ntBASIC4.88□□□□□ -1.63
PCNAP12004 RN7SL172P-201ENST00000460535 303 ntBASIC4.88□□□□□ -1.63
PCNAP12004 APOOP2-201ENST00000461561 539 ntBASIC4.88□□□□□ -1.63
PCNAP12004 RN7SL30P-201ENST00000488416 306 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC072052.1-201ENST00000496556 306 ntBASIC4.88□□□□□ -1.63
PCNAP12004 ARL4AP1-201ENST00000503220 705 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC010350.1-201ENST00000504908 231 ntBASIC4.88□□□□□ -1.63
PCNAP12004 HIGD1AP14-201ENST00000507617 282 ntBASIC4.88□□□□□ -1.63
PCNAP12004 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.88□□□□□ -1.63
PCNAP12004 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.88□□□□□ -1.63
PCNAP12004 OR8I1P-201ENST00000529291 931 ntBASIC4.88□□□□□ -1.63
PCNAP12004 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.88□□□□□ -1.63
PCNAP12004 AC087897.1-201ENST00000550134 156 ntBASIC4.88□□□□□ -1.63
PCNAP12004 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.88□□□□□ -1.63
PCNAP12004 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.88□□□□□ -1.63
PCNAP12004 RPP40P2-201ENST00000603596 712 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC013468.1-201ENST00000608680 598 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC055764.2-201ENST00000610089 670 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC022467.1-201ENST00000614738 749 ntBASIC4.88□□□□□ -1.63
PCNAP12004 MIR6729-201ENST00000618194 65 ntBASIC4.88□□□□□ -1.63
PCNAP12004 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.88□□□□□ -1.63
PCNAP12004 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.88□□□□□ -1.63
PCNAP12004 AC099494.2-201ENST00000623371 978 ntBASIC4.88□□□□□ -1.63
PCNAP12004 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.88□□□□□ -1.63
PCNAP12004 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PCNAP12004 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
PCNAP12004 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.88□□□□□ -1.63
PCNAP12004 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
PCNAP12004 PANDAR-201ENST00000629595 1506 ntBASIC4.87□□□□□ -1.63
PCNAP12004 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 OR14L1P-202ENST00000641545 3009 ntBASIC4.87□□□□□ -1.63
PCNAP12004 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.87□□□□□ -1.63
PCNAP12004 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 ENSAP3-201ENST00000312710 333 ntBASIC4.87□□□□□ -1.63
PCNAP12004 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 MIR223-201ENST00000385204 110 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC093719.1-202ENST00000392735 373 ntBASIC4.87□□□□□ -1.63
PCNAP12004 ATP5F1P2-201ENST00000398143 760 ntBASIC4.87□□□□□ -1.63
PCNAP12004 RPL7P27-201ENST00000403775 720 ntBASIC4.87□□□□□ -1.63
PCNAP12004 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AP000357.1-201ENST00000409926 1165 ntBASIC4.87□□□□□ -1.63
PCNAP12004 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms