Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
VTNP04004 MFSD8-242ENST00000641690 4199 ntBASIC4.84□□□□□ -1.63
VTNP04004 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VTNP04004 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 AC005261.4-201ENST00000600047 1385 ntBASIC4.84□□□□□ -1.63
VTNP04004 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VTNP04004 RNA5SP515-201ENST00000364570 118 ntBASIC4.84□□□□□ -1.63
VTNP04004 RNA5SP151-201ENST00000365632 117 ntBASIC4.84□□□□□ -1.63
VTNP04004 SNORA70C-201ENST00000384538 135 ntBASIC4.84□□□□□ -1.63
VTNP04004 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 AL356057.1-202ENST00000402263 756 ntBASIC4.84□□□□□ -1.63
VTNP04004 SNORA11F-201ENST00000408237 128 ntBASIC4.84□□□□□ -1.63
VTNP04004 SNORA79B-201ENST00000410557 148 ntBASIC4.84□□□□□ -1.63
VTNP04004 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 RPS27AP12-201ENST00000429552 465 ntBASIC4.84□□□□□ -1.63
VTNP04004 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.84□□□□□ -1.63
VTNP04004 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.84□□□□□ -1.63
VTNP04004 BUD31P2-201ENST00000449374 300 ntBASIC4.84□□□□□ -1.63
VTNP04004 MTND5P8-201ENST00000449817 1083 ntBASIC4.84□□□□□ -1.63
VTNP04004 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
VTNP04004 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.84□□□□□ -1.63
VTNP04004 SEPT7P3-201ENST00000455017 621 ntBASIC4.84□□□□□ -1.63
VTNP04004 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AC025768.1-201ENST00000510057 267 ntBASIC4.84□□□□□ -1.63
VTNP04004 MTCO1P35-201ENST00000515270 228 ntBASIC4.84□□□□□ -1.63
VTNP04004 RNU6-491P-201ENST00000516099 110 ntBASIC4.84□□□□□ -1.63
VTNP04004 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.84□□□□□ -1.63
VTNP04004 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AC025884.1-201ENST00000556034 378 ntBASIC4.84□□□□□ -1.63
VTNP04004 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AC092868.3-201ENST00000560515 784 ntBASIC4.84□□□□□ -1.63
VTNP04004 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.84□□□□□ -1.63
VTNP04004 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
VTNP04004 FAM106CP-201ENST00000582212 507 ntBASIC4.84□□□□□ -1.63
VTNP04004 AC008966.2-201ENST00000606157 453 ntBASIC4.84□□□□□ -1.63
VTNP04004 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.84□□□□□ -1.63
VTNP04004 AL023881.1-201ENST00000621088 301 ntBASIC4.84□□□□□ -1.63
VTNP04004 AP002371.2-201ENST00000624450 503 ntBASIC4.84□□□□□ -1.63
VTNP04004 AL138960.2-201ENST00000625145 535 ntBASIC4.84□□□□□ -1.63
VTNP04004 AC140479.6-201ENST00000633535 357 ntBASIC4.84□□□□□ -1.63
VTNP04004 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTNP04004 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
VTNP04004 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
VTNP04004 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
VTNP04004 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
VTNP04004 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.84□□□□□ -1.64
VTNP04004 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AC000374.1-201ENST00000434698 1745 ntBASIC4.83□□□□□ -1.64
VTNP04004 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AC010300.1-201ENST00000600671 5134 ntBASIC4.83□□□□□ -1.64
VTNP04004 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.83□□□□□ -1.64
VTNP04004 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VTNP04004 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VTNP04004 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
VTNP04004 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.83□□□□□ -1.64
VTNP04004 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.83□□□□□ -1.64
VTNP04004 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.83□□□□□ -1.64
VTNP04004 HMGB3P10-201ENST00000434734 572 ntBASIC4.83□□□□□ -1.64
VTNP04004 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.83□□□□□ -1.64
VTNP04004 CCRL1P1-201ENST00000449542 1053 ntBASIC4.83□□□□□ -1.64
VTNP04004 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.83□□□□□ -1.64
VTNP04004 RPL7P19-201ENST00000469948 618 ntBASIC4.83□□□□□ -1.64
VTNP04004 RPL23AP37-201ENST00000479658 549 ntBASIC4.83□□□□□ -1.64
VTNP04004 RPS4XP18-201ENST00000495480 763 ntBASIC4.83□□□□□ -1.64
VTNP04004 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AC008628.1-201ENST00000508663 265 ntBASIC4.83□□□□□ -1.64
VTNP04004 ATP1B1P1-201ENST00000509767 915 ntBASIC4.83□□□□□ -1.64
VTNP04004 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.83□□□□□ -1.64
VTNP04004 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 RNA5SP446-201ENST00000515955 82 ntBASIC4.83□□□□□ -1.64
VTNP04004 RNU6-889P-201ENST00000517189 103 ntBASIC4.83□□□□□ -1.64
VTNP04004 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.83□□□□□ -1.64
VTNP04004 AP003730.1-201ENST00000524605 285 ntBASIC4.83□□□□□ -1.64
VTNP04004 OR5BC1P-201ENST00000529327 739 ntBASIC4.83□□□□□ -1.64
VTNP04004 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.83□□□□□ -1.64
VTNP04004 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.83□□□□□ -1.64
VTNP04004 AC007224.1-201ENST00000564410 144 ntBASIC4.83□□□□□ -1.64
VTNP04004 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 AC067959.1-201ENST00000604334 379 ntBASIC4.83□□□□□ -1.64
VTNP04004 AL354984.3-201ENST00000604803 325 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms