Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRAV11-201ENST00000539512 339 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 AC090312.1-201ENST00000580637 348 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA1P02708 AC012213.4-201ENST00000606457 354 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 BMS1P21-201ENST00000634565 365 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 MIR492-201ENST00000638676 116 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 AL592182.3-201ENST00000642132 3304 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 AC093535.2-201ENST00000624769 2326 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA1P02708 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA1P02708 AP000542.2-201ENST00000623199 6179 ntBASIC4.87□□□□□ -1.63
CHRNA1P02708 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA1P02708 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA1P02708 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA1P02708 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA1P02708 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CHRNA1P02708 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA1P02708 AC126323.6-202ENST00000568092 3511 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AL158163.1-201ENST00000603915 1649 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CHRNA1P02708 OR56B2P-201ENST00000317102 954 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 RNU1-13P-201ENST00000384499 162 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 RPL36AP10-201ENST00000421785 322 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA1P02708 RPL23AP52-201ENST00000439311 478 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AL031584.1-201ENST00000447169 754 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 RPL31P20-201ENST00000449593 360 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA1P02708 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA1P02708 BTG4P1-201ENST00000510421 183 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA1P02708 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AC074050.1-201ENST00000563247 211 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AC106785.1-201ENST00000565935 262 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 FAM106CP-201ENST00000582212 507 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AC023762.1-201ENST00000603280 584 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AC090948.2-201ENST00000607363 564 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AL391597.1-201ENST00000618707 694 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 AL161637.1-201ENST00000622380 412 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 AC087565.3-202ENST00000642085 1603 ntBASIC4.86□□□□□ -1.63
CHRNA1P02708 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CHRNA1P02708 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA1P02708 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CHRNA1P02708 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA1P02708 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.85□□□□□ -1.63
CHRNA1P02708 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CHRNA1P02708 MIR383-201ENST00000362257 73 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.85□□□□□ -1.63
CHRNA1P02708 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.85□□□□□ -1.63
CHRNA1P02708 RAD1P2-201ENST00000446414 663 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 AC239367.2-201ENST00000447309 705 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.85□□□□□ -1.63
CHRNA1P02708 AC243772.1-201ENST00000451620 410 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 RPS7P7-201ENST00000463499 571 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.85□□□□□ -1.63
CHRNA1P02708 ATG10-AS1-201ENST00000504846 648 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 AC113430.1-201ENST00000506872 718 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
CHRNA1P02708 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.85□□□□□ -1.63
CHRNA1P02708 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.85□□□□□ -1.63
CHRNA1P02708 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.85□□□□□ -1.63
CHRNA1P02708 AC005520.3-201ENST00000602874 370 ntBASIC4.85□□□□□ -1.63
CHRNA1P02708 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.85□□□□□ -1.63
CHRNA1P02708 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.85□□□□□ -1.63
CHRNA1P02708 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHRNA1P02708 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.85□□□□□ -1.63
CHRNA1P02708 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CHRNA1P02708 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA1P02708 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA1P02708 ASNSP1-201ENST00000518311 1939 ntBASIC4.84□□□□□ -1.63
CHRNA1P02708 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.84□□□□□ -1.63
CHRNA1P02708 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHRNA1P02708 LARP1BP1-201ENST00000506036 1359 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms