Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.57□□□□□ -1.68
APOEP02649 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.57□□□□□ -1.68
APOEP02649 AC068831.4-201ENST00000556118 109 ntBASIC4.57□□□□□ -1.68
APOEP02649 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.57□□□□□ -1.68
APOEP02649 AC090312.1-201ENST00000580637 348 ntBASIC4.57□□□□□ -1.68
APOEP02649 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.57□□□□□ -1.68
APOEP02649 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
APOEP02649 AC113403.1-201ENST00000604910 193 ntBASIC4.57□□□□□ -1.68
APOEP02649 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.57□□□□□ -1.68
APOEP02649 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
APOEP02649 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.57□□□□□ -1.68
APOEP02649 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 CR382285.2-201ENST00000624662 1495 ntBASIC4.56□□□□□ -1.68
APOEP02649 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
APOEP02649 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.56□□□□□ -1.68
APOEP02649 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
APOEP02649 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
APOEP02649 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.56□□□□□ -1.68
APOEP02649 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
APOEP02649 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.56□□□□□ -1.68
APOEP02649 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
APOEP02649 AL590609.2-201ENST00000421430 368 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.56□□□□□ -1.68
APOEP02649 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
APOEP02649 SKP1P3-201ENST00000429280 487 ntBASIC4.56□□□□□ -1.68
APOEP02649 RPS29P17-201ENST00000430795 166 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC016712.1-201ENST00000431088 378 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.56□□□□□ -1.68
APOEP02649 NFYAP1-201ENST00000431953 972 ntBASIC4.56□□□□□ -1.68
APOEP02649 CBX1P1-201ENST00000440184 427 ntBASIC4.56□□□□□ -1.68
APOEP02649 FHP1-201ENST00000442741 703 ntBASIC4.56□□□□□ -1.68
APOEP02649 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.56□□□□□ -1.68
APOEP02649 RPS26P28-201ENST00000470806 348 ntBASIC4.56□□□□□ -1.68
APOEP02649 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
APOEP02649 ATP1B1P1-201ENST00000509767 915 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.56□□□□□ -1.68
APOEP02649 OR51K1P-201ENST00000510214 950 ntBASIC4.56□□□□□ -1.68
APOEP02649 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC010476.1-201ENST00000519111 851 ntBASIC4.56□□□□□ -1.68
APOEP02649 IGLV3-26-201ENST00000520756 302 ntBASIC4.56□□□□□ -1.68
APOEP02649 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.56□□□□□ -1.68
APOEP02649 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.56□□□□□ -1.68
APOEP02649 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.56□□□□□ -1.68
APOEP02649 Z98200.1-201ENST00000607298 470 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC015908.5-201ENST00000623289 343 ntBASIC4.56□□□□□ -1.68
APOEP02649 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
APOEP02649 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
APOEP02649 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 AC105074.1-201ENST00000623380 3095 ntBASIC4.56□□□□□ -1.68
APOEP02649 VPS35P1-201ENST00000563400 1518 ntBASIC4.56□□□□□ -1.68
APOEP02649 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
APOEP02649 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOEP02649 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.55□□□□□ -1.68
APOEP02649 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOEP02649 MIR331-201ENST00000362302 94 ntBASIC4.55□□□□□ -1.68
APOEP02649 RNU4-25P-201ENST00000410569 230 ntBASIC4.55□□□□□ -1.68
APOEP02649 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.55□□□□□ -1.68
APOEP02649 AC011933.1-201ENST00000413334 321 ntBASIC4.55□□□□□ -1.68
APOEP02649 AL592293.2-201ENST00000422292 996 ntBASIC4.55□□□□□ -1.68
APOEP02649 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.55□□□□□ -1.68
APOEP02649 AC073143.1-201ENST00000436316 395 ntBASIC4.55□□□□□ -1.68
APOEP02649 AC116533.1-201ENST00000459748 321 ntBASIC4.55□□□□□ -1.68
APOEP02649 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.55□□□□□ -1.68
APOEP02649 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 OR8G5-201ENST00000524943 1041 ntBASIC4.55□□□□□ -1.68
APOEP02649 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 MTND6P33-201ENST00000571794 183 ntBASIC4.55□□□□□ -1.68
APOEP02649 AL121834.1-201ENST00000572284 509 ntBASIC4.55□□□□□ -1.68
APOEP02649 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.55□□□□□ -1.68
APOEP02649 AC005229.3-201ENST00000603438 323 ntBASIC4.55□□□□□ -1.68
APOEP02649 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 AL160290.3-201ENST00000604869 165 ntBASIC4.55□□□□□ -1.68
APOEP02649 AC025175.1-201ENST00000606482 759 ntBASIC4.55□□□□□ -1.68
APOEP02649 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.55□□□□□ -1.68
APOEP02649 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 AL138721.1-201ENST00000616756 179 ntBASIC4.55□□□□□ -1.68
APOEP02649 AL121890.3-201ENST00000618494 516 ntBASIC4.55□□□□□ -1.68
APOEP02649 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.55□□□□□ -1.68
APOEP02649 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
APOEP02649 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOEP02649 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
APOEP02649 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.54□□□□□ -1.68
APOEP02649 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
APOEP02649 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
APOEP02649 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms