Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UPK1BO75841 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 AC021146.4-201ENST00000309229 279 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 RNA5SP183-201ENST00000362452 119 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
UPK1BO75841 ST13P16-201ENST00000401760 781 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL049745.1-201ENST00000433953 286 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AL138899.2-201ENST00000439139 499 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 MTCO3P16-201ENST00000454456 754 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 MTCO3P20-201ENST00000454926 688 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 EIF2S2P4-201ENST00000461070 984 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC098818.1-201ENST00000478593 252 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC092349.1-201ENST00000504903 310 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 MRPS5P3-201ENST00000515577 166 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 RNU6-1231P-201ENST00000517185 103 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC008676.3-201ENST00000521237 435 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.71□□□□□ -1.82
UPK1BO75841 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.71□□□□□ -1.82
UPK1BO75841 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 AC068446.3-201ENST00000555285 382 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 NPM1P47-201ENST00000560843 856 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 CCDC58P1-201ENST00000578567 430 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC069366.1-201ENST00000583159 838 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL391834.1-201ENST00000609609 560 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 AL391261.4-201ENST00000616012 481 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC006065.6-201ENST00000625201 545 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK1BO75841 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UPK1BO75841 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 AL133412.1-201ENST00000380194 2992 ntBASIC3.71□□□□□ -1.82
UPK1BO75841 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK1BO75841 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.71□□□□□ -1.82
UPK1BO75841 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
UPK1BO75841 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 RNU6-670P-201ENST00000364312 104 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK1BO75841 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
UPK1BO75841 AP002530.1-201ENST00000405705 684 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK1BO75841 MIR1275-201ENST00000408770 80 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1BO75841 MTCO3P21-201ENST00000430791 643 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 RPL12P28-201ENST00000430852 489 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 Z85994.2-201ENST00000434327 452 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK1BO75841 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1BO75841 AC010733.1-201ENST00000451515 401 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 RNU6-1218P-201ENST00000458990 108 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1BO75841 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
UPK1BO75841 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1BO75841 BNIP3P41-201ENST00000503774 571 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC010627.1-201ENST00000503819 1294 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 ATG10-AS1-201ENST00000504846 648 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC007016.1-201ENST00000512110 244 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1BO75841 HIGD1AP18-201ENST00000520730 278 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK1BO75841 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK1BO75841 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK1BO75841 AC092868.3-201ENST00000560515 784 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC026826.3-201ENST00000561747 158 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AL133457.1-201ENST00000564251 987 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 PSMA6P4-201ENST00000603247 718 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AP000255.1-201ENST00000610276 676 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC007204.2-201ENST00000615022 616 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 uc_338.32-201ENST00000615087 172 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 RPL23AP61-201ENST00000623642 466 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 U3.53-201ENST00000628922 216 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 AC136428.4-201ENST00000634254 1155 ntBASIC3.7□□□□□ -1.82
UPK1BO75841 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms