Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AP002906.1-201ENST00000603405 233 ntBASIC4.88□□□□□ -1.63
LDB2O43679 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC011330.2-201ENST00000621680 635 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC091905.4-201ENST00000623432 202 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LDB2O43679 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDB2O43679 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 AL603750.1-201ENST00000624216 1717 ntBASIC4.88□□□□□ -1.63
LDB2O43679 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
LDB2O43679 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 SNORA51.8-201ENST00000384234 132 ntBASIC4.87□□□□□ -1.63
LDB2O43679 HMGB3P7-201ENST00000400214 611 ntBASIC4.87□□□□□ -1.63
LDB2O43679 RPL7P27-201ENST00000403775 720 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC002524.1-201ENST00000411687 547 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC010385.1-201ENST00000412374 256 ntBASIC4.87□□□□□ -1.63
LDB2O43679 RBMY2KP-201ENST00000418221 992 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AL449283.1-202ENST00000418249 604 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC023128.2-201ENST00000420880 1223 ntBASIC4.87□□□□□ -1.63
LDB2O43679 RGS17P1-201ENST00000423358 553 ntBASIC4.87□□□□□ -1.63
LDB2O43679 EIF4HP2-201ENST00000424380 563 ntBASIC4.87□□□□□ -1.63
LDB2O43679 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
LDB2O43679 OR2AH1P-201ENST00000425717 928 ntBASIC4.87□□□□□ -1.63
LDB2O43679 ETF1P3-201ENST00000430422 1160 ntBASIC4.87□□□□□ -1.63
LDB2O43679 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 CR769776.1-201ENST00000441254 787 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.87□□□□□ -1.63
LDB2O43679 RHEBP2-201ENST00000450289 600 ntBASIC4.87□□□□□ -1.63
LDB2O43679 HIGD1AP8-201ENST00000453927 274 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 AC083982.1-201ENST00000485679 344 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC134050.1-201ENST00000495088 933 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.87□□□□□ -1.63
LDB2O43679 RNU6-1308P-201ENST00000516817 103 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.87□□□□□ -1.63
LDB2O43679 IGHV3-63-201ENST00000518422 341 ntBASIC4.87□□□□□ -1.63
LDB2O43679 MTATP6P15-201ENST00000527233 835 ntBASIC4.87□□□□□ -1.63
LDB2O43679 UBTFL10-201ENST00000528532 562 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.87□□□□□ -1.63
LDB2O43679 AC008033.2-201ENST00000542626 177 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.87□□□□□ -1.63
LDB2O43679 DUX4L52-201ENST00000549363 777 ntBASIC4.87□□□□□ -1.63
LDB2O43679 MRPS36P5-201ENST00000551909 298 ntBASIC4.87□□□□□ -1.63
LDB2O43679 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 OR4U1P-201ENST00000554958 912 ntBASIC4.87□□□□□ -1.63
LDB2O43679 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LDB2O43679 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.87□□□□□ -1.63
LDB2O43679 SNORA74C-1-201ENST00000580726 201 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC005412.1-201ENST00000580812 1049 ntBASIC4.87□□□□□ -1.63
LDB2O43679 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.87□□□□□ -1.63
LDB2O43679 AC020910.3-201ENST00000603701 874 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC018618.2-201ENST00000604770 446 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC007497.1-201ENST00000610421 561 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AL158062.1-201ENST00000619632 745 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AP002791.1-201ENST00000623291 381 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC120349.3-201ENST00000624377 529 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AC009039.2-201ENST00000624524 529 ntBASIC4.87□□□□□ -1.63
LDB2O43679 CR381572.2-201ENST00000624852 397 ntBASIC4.87□□□□□ -1.63
LDB2O43679 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 CU459211.1-201ENST00000635667 749 ntBASIC4.87□□□□□ -1.63
LDB2O43679 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
LDB2O43679 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 DDX18P5-201ENST00000534547 1306 ntBASIC4.87□□□□□ -1.63
LDB2O43679 SMG1P6-201ENST00000532337 2930 ntBASIC4.87□□□□□ -1.63
LDB2O43679 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
LDB2O43679 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDB2O43679 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LDB2O43679 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms