Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.98□□□□□ -1.61
SMAD6O43541 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AP001207.2-201ENST00000519490 539 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.98□□□□□ -1.61
SMAD6O43541 MTCYBP23-201ENST00000558717 1102 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 MTCYBP33-201ENST00000575007 1130 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC127024.5-201ENST00000580085 462 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 MIR4737-201ENST00000583979 81 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 PIGPP4-201ENST00000584447 307 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 AL022067.1-201ENST00000602426 454 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC021171.1-201ENST00000603137 706 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC080013.3-201ENST00000606839 578 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 DDX43P2-201ENST00000604753 1354 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 AC093535.2-201ENST00000624769 2326 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SMAD6O43541 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMAD6O43541 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
SMAD6O43541 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.98□□□□□ -1.61
SMAD6O43541 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.98□□□□□ -1.61
SMAD6O43541 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.97□□□□□ -1.61
SMAD6O43541 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 MTND4P5-201ENST00000435821 1374 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SMAD6O43541 RNU2-50P-201ENST00000410494 143 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 RNA5SP345-201ENST00000410646 108 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 AC009518.2-201ENST00000418056 731 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 PTP4A1P7-201ENST00000423476 514 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 AC010099.3-201ENST00000423896 409 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 OR2B7P-201ENST00000429302 934 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.97□□□□□ -1.61
SMAD6O43541 AC022022.1-201ENST00000430304 178 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 MTND2P21-201ENST00000436242 1042 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 THAP5P1-201ENST00000439089 262 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 MTCO1P53-201ENST00000441633 699 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 RPL7P33-201ENST00000444159 742 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 AURKAPS2-201ENST00000454983 333 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 RNU6-276P-201ENST00000516114 96 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 NPM1P52-201ENST00000518264 846 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 AC091163.3-201ENST00000518269 1144 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.97□□□□□ -1.61
SMAD6O43541 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.97□□□□□ -1.61
SMAD6O43541 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.97□□□□□ -1.61
SMAD6O43541 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 AC009097.3-201ENST00000563557 1018 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 AC008121.2-201ENST00000614647 523 ntBASIC4.97□□□□□ -1.61
SMAD6O43541 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SMAD6O43541 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SMAD6O43541 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SMAD6O43541 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SMAD6O43541 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SMAD6O43541 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SMAD6O43541 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
SMAD6O43541 MTND4P8-201ENST00000514997 1362 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 MIR16-2-201ENST00000362117 81 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 RPL10P10-201ENST00000403509 664 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 RNA5SP113-201ENST00000410486 84 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 RNU4-27P-201ENST00000410889 139 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC073136.2-201ENST00000417282 849 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC013429.2-201ENST00000418798 781 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 KRR1P1-201ENST00000419430 803 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL606495.1-201ENST00000422100 813 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 RNF19BPX-201ENST00000426224 625 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 PTP4A1P3-201ENST00000433661 420 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 AC092447.2-201ENST00000435487 669 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms