Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 RPA2P1-201ENST00000556557 721 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC090236.2-201ENST00000587933 1101 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXA3O43365 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
HOXA3O43365 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXA3O43365 AC097467.4-201ENST00000605504 141 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AC103710.4-201ENST00000609301 899 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AL138960.1-201ENST00000613838 513 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AL359314.1-201ENST00000616913 261 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 AC093591.3-201ENST00000634516 308 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 CRYM-AS1-204ENST00000637983 556 ntBASIC4.98□□□□□ -1.61
HOXA3O43365 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA3O43365 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA3O43365 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA3O43365 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXA3O43365 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXA3O43365 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA3O43365 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXA3O43365 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXA3O43365 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXA3O43365 GDI2P1-201ENST00000429312 1336 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 AC025809.2-201ENST00000625085 1802 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
HOXA3O43365 AL161901.1-201ENST00000624954 3425 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC004656.1-201ENST00000568479 4951 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA3O43365 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXA3O43365 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXA3O43365 SNRPEP3-201ENST00000338402 276 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 RNU6-694P-201ENST00000364071 147 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 RNA5SP478-201ENST00000364657 115 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 RN7SKP69-201ENST00000365390 305 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXA3O43365 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 AL031985.1-201ENST00000392713 418 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 Y_RNA.598-201ENST00000410480 95 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 U3.43-201ENST00000410734 213 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AL139128.1-201ENST00000413921 941 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 CCDC58P2-201ENST00000417131 366 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC245884.2-201ENST00000426257 404 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC002504.1-201ENST00000438281 691 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 AL035551.1-201ENST00000446931 348 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 RPL31P15-201ENST00000449770 338 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 CFL1P4-201ENST00000451536 498 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 HMGB1P4-201ENST00000455362 567 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 RPL7AP52-201ENST00000458096 790 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 snoU109.1-201ENST00000459339 135 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC091544.1-201ENST00000484702 348 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 RNA5SP434-201ENST00000516647 121 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXA3O43365 AC008429.4-201ENST00000521201 182 ntBASIC4.97□□□□□ -1.61
HOXA3O43365 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXA3O43365 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXA3O43365 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms