Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM38O00635 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 MTCYBP13-201ENST00000578634 1093 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 MIR4436B2-201ENST00000581415 91 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 MIR4436B1-201ENST00000583272 91 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC119751.7-201ENST00000600494 245 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC069307.1-201ENST00000602820 447 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC009163.6-201ENST00000612367 342 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 uc_338.7-201ENST00000621834 124 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 CYP4F35P-202ENST00000636121 390 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRIM38O00635 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TRIM38O00635 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC104623.2-202ENST00000623477 4002 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 AC100757.1-201ENST00000616872 1835 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM38O00635 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM38O00635 OR1L6-202ENST00000373684 1044 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 SNORD56.6-201ENST00000384569 71 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RNU1-149P-201ENST00000390870 161 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 SNORA48.4-201ENST00000391089 134 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 MCTS2P-201ENST00000394552 546 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 OR4K12P-201ENST00000406538 961 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RNU6-77P-201ENST00000410554 91 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RNU2-6P-201ENST00000411404 190 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 AL121878.1-201ENST00000418638 859 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 NANOGP5-201ENST00000424456 877 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 HSPD1P12-201ENST00000429127 1069 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RPL12P28-201ENST00000430852 489 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 GSTM5P1-201ENST00000434751 660 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 ELOCP11-201ENST00000436690 332 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 MUPP-201ENST00000438111 566 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 ELOCP10-201ENST00000440624 327 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 ELOCP16-201ENST00000444494 332 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 TPTE2P6-202ENST00000445572 1007 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC090804.1-201ENST00000448870 490 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC073850.1-201ENST00000449243 255 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL009048.1-201ENST00000450437 298 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 PRPF38AP1-201ENST00000451976 933 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC002553.2-201ENST00000453217 340 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC091959.2-201ENST00000477363 321 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AP000563.1-201ENST00000490865 758 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 RPS12P31-201ENST00000491419 398 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC098799.3-201ENST00000506095 438 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 SCARNA16.4-201ENST00000516956 187 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 CDH12P4-201ENST00000517835 295 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 CDH12P3-201ENST00000517935 295 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 CDH12P1-201ENST00000518435 295 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 OR8G5-201ENST00000524943 1041 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 OR10V3P-201ENST00000525712 725 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 OR8G3P-201ENST00000533406 921 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC125611.1-201ENST00000549563 229 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC127381.1-201ENST00000555979 939 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 AC040958.1-201ENST00000561102 201 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AP005403.1-201ENST00000579720 229 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC061975.8-201ENST00000587058 721 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AP001160.4-201ENST00000596971 382 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 NTAN1P1-201ENST00000603150 646 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC123786.2-201ENST00000603459 275 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC108738.1-201ENST00000603703 237 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 ELOCP34-201ENST00000604436 327 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 TAS2R6P-201ENST00000605022 826 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL450336.1-201ENST00000605180 586 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 AL133507.1-201ENST00000605269 557 ntBASIC5.32□□□□□ -1.56
TRIM38O00635 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM38O00635 AL049539.1-201ENST00000611964 459 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms