Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 AC009948.3-201ENST00000603415 1798 ntBASIC6.52□□□□□ -1.37
SOX1O00570 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SOX1O00570 Y_RNA.356-201ENST00000365475 113 ntBASIC6.52□□□□□ -1.37
SOX1O00570 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 RNU6-780P-201ENST00000391030 104 ntBASIC6.52□□□□□ -1.37
SOX1O00570 RPL23AP29-201ENST00000397284 453 ntBASIC6.52□□□□□ -1.37
SOX1O00570 RPS24P12-201ENST00000402084 394 ntBASIC6.52□□□□□ -1.37
SOX1O00570 FAT1P1-201ENST00000406588 507 ntBASIC6.52□□□□□ -1.37
SOX1O00570 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 AL450992.3-201ENST00000413192 568 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.52□□□□□ -1.37
SOX1O00570 USP9YP27-201ENST00000418455 438 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AC005033.1-201ENST00000428904 813 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.52□□□□□ -1.37
SOX1O00570 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.52□□□□□ -1.37
SOX1O00570 AL513175.1-201ENST00000431492 780 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AL049745.1-201ENST00000433953 286 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 RABEPKP1-201ENST00000440529 1026 ntBASIC6.52□□□□□ -1.37
SOX1O00570 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 AC022447.3-201ENST00000506865 495 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 AF131216.2-201ENST00000512316 564 ntBASIC6.52□□□□□ -1.37
SOX1O00570 RNA5SP135-201ENST00000517019 125 ntBASIC6.52□□□□□ -1.37
SOX1O00570 MTND1P35-201ENST00000526739 508 ntBASIC6.52□□□□□ -1.37
SOX1O00570 AP000676.2-201ENST00000529711 301 ntBASIC6.52□□□□□ -1.37
SOX1O00570 OR5AP1P-201ENST00000529730 940 ntBASIC6.52□□□□□ -1.37
SOX1O00570 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.52□□□□□ -1.37
SOX1O00570 AC005498.1-201ENST00000592125 465 ntBASIC6.52□□□□□ -1.37
SOX1O00570 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 MIR8080-201ENST00000622224 89 ntBASIC6.52□□□□□ -1.37
SOX1O00570 MIR1321-201ENST00000637766 79 ntBASIC6.52□□□□□ -1.37
SOX1O00570 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 GNL2P1-201ENST00000451274 2190 ntBASIC6.52□□□□□ -1.37
SOX1O00570 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SOX1O00570 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.52□□□□□ -1.37
SOX1O00570 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 AC104837.1-201ENST00000444644 1587 ntBASIC6.52□□□□□ -1.37
SOX1O00570 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SOX1O00570 AC006210.2-201ENST00000367074 1545 ntBASIC6.51□□□□□ -1.37
SOX1O00570 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SOX1O00570 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 CASC19-260ENST00000641828 2001 ntBASIC6.51□□□□□ -1.37
SOX1O00570 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 RN7SKP128-201ENST00000364270 303 ntBASIC6.51□□□□□ -1.37
SOX1O00570 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SOX1O00570 RNU6-877P-201ENST00000383868 107 ntBASIC6.51□□□□□ -1.37
SOX1O00570 Y_RNA.548-201ENST00000384656 105 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AL096829.1-201ENST00000413677 457 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC114814.2-201ENST00000419195 485 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC062016.2-201ENST00000420950 676 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 HMGB3P24-201ENST00000433260 622 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AL451074.3-201ENST00000437709 472 ntBASIC6.51□□□□□ -1.37
SOX1O00570 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 RPL31P44-201ENST00000447680 377 ntBASIC6.51□□□□□ -1.37
SOX1O00570 MTND6P5-201ENST00000448266 512 ntBASIC6.51□□□□□ -1.37
SOX1O00570 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.51□□□□□ -1.37
SOX1O00570 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 AL139156.3-201ENST00000454802 394 ntBASIC6.51□□□□□ -1.37
SOX1O00570 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 AC092757.1-201ENST00000467293 467 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 PGAM1P13-201ENST00000507497 754 ntBASIC6.51□□□□□ -1.37
SOX1O00570 IMPA1P1-201ENST00000510718 842 ntBASIC6.51□□□□□ -1.37
SOX1O00570 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.51□□□□□ -1.37
SOX1O00570 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.51□□□□□ -1.37
SOX1O00570 HMGN2P36-201ENST00000529541 409 ntBASIC6.51□□□□□ -1.37
SOX1O00570 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.51□□□□□ -1.37
SOX1O00570 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms