Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA3F8WFD2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 MIR92A2-201ENST00000385299 75 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC093719.1-202ENST00000392735 373 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 UBE2V1P11-201ENST00000411559 285 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC013404.1-201ENST00000413068 249 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 TCEA1P4-201ENST00000415066 844 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 TBCAP2-201ENST00000416175 326 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC009302.1-201ENST00000417147 390 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 QRSL1P2-201ENST00000418582 964 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 OR2B7P-201ENST00000429302 934 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 MTCO1P43-201ENST00000431831 488 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 FTH1P16-201ENST00000435241 552 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RPL7AP61-201ENST00000443410 636 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 PTMAP3-201ENST00000447474 330 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RN7SL809P-201ENST00000482040 297 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RN7SL346P-201ENST00000491561 294 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 CEACAMP10-202ENST00000495431 496 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC093720.1-201ENST00000505681 714 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 OR51K1P-201ENST00000510214 950 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC121161.1-201ENST00000510606 652 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 RAB9BP1-201ENST00000519581 626 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 C1DP5-201ENST00000525775 383 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC245100.7-201ENST00000609678 442 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 MIR6780A-201ENST00000615089 68 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC073136.1-201ENST00000449426 2884 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 AC120338.1-201ENST00000625074 1541 ntBASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.41□□□□□ -1.7
NPIPA3F8WFD2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 RNF6P1-201ENST00000444889 1784 ntBASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NPIPA3F8WFD2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC079741.1-201ENST00000321498 212 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 RN7SKP100-201ENST00000411258 284 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 VTA1P1-201ENST00000414044 866 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 BX664727.1-201ENST00000416024 466 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 SEC63P1-201ENST00000425785 1258 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL512637.2-201ENST00000431287 1256 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 NRBF2P3-201ENST00000432731 865 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL031663.1-201ENST00000437445 219 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 CBX1P4-201ENST00000439415 457 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 SETP6-201ENST00000479329 568 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 NIP7P2-201ENST00000485801 544 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC104629.1-201ENST00000494226 508 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 Y_RNA.719-201ENST00000517156 106 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AP002812.4-201ENST00000532139 286 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 POLR2KP1-201ENST00000553226 168 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 GLRXP2-201ENST00000555594 321 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC106734.1-201ENST00000568646 663 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 MIR4472-2-201ENST00000582069 67 ntBASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NPIPA3F8WFD2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms