Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC026688.1-201ENST00000520639 1168 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC090515.3-201ENST00000560431 315 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC021483.2-201ENST00000567415 758 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 Z98755.1-201ENST00000407015 1384 ntBASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
NPIPA2E9PIF3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.72
NPIPA2E9PIF3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 MTND4P21-201ENST00000453886 1357 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC096656.1-201ENST00000623826 1364 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 MIR92A2-201ENST00000385299 75 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 MIR708-201ENST00000390708 88 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL356057.1-202ENST00000402263 756 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 RNA5SP345-201ENST00000410646 108 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 FAR1P1-201ENST00000427163 934 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 C4BPAP2-201ENST00000428434 478 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL359265.2-201ENST00000434367 631 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL451139.1-201ENST00000434718 346 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 OR9N1P-202ENST00000494289 481 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC104971.1-201ENST00000495117 578 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 RNU2-30P-201ENST00000516209 141 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 RNU6-709P-201ENST00000517257 104 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 BUD31P1-201ENST00000521828 359 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 CKS1BP1-201ENST00000555221 240 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AL121932.1-201ENST00000605542 214 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC242628.1-201ENST00000606810 391 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC015914.2-201ENST00000618167 288 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC139769.3-201ENST00000618383 175 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 DHX9P1-201ENST00000436565 3076 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 AC093311.1-201ENST00000506586 2021 ntBASIC4.33□□□□□ -1.72
NPIPA2E9PIF3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AL136164.3-201ENST00000624429 3978 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA2E9PIF3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms