Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC018529.3-201ENST00000624212 2254 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 MIR1179-201ENST00000408703 91 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AL359265.2-201ENST00000434367 631 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 GSTA7P-201ENST00000438425 448 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC107015.1-201ENST00000466902 747 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC010374.1-201ENST00000503762 1237 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 CCNHP1-201ENST00000513311 678 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC063950.1-201ENST00000552036 308 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC084783.1-201ENST00000565846 910 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC115286.1-201ENST00000604298 434 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC025175.1-201ENST00000606482 759 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 AC095038.2-201ENST00000621464 1070 ntBASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM49D1C9J1S8 RAD17P1-201ENST00000418130 2042 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 MTCO1P8-201ENST00000416914 1523 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 OR5P1P-201ENST00000299512 925 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 MIR585-201ENST00000384887 94 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 YWHAEP5-201ENST00000431545 765 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 RPL23AP52-201ENST00000439311 478 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 NPM1P39-201ENST00000449818 867 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 RN7SL354P-201ENST00000469282 294 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 SEPT7P6-201ENST00000469999 1143 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 HMGB3P13-201ENST00000511263 607 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 DYNLL1P4-201ENST00000549314 266 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 EIF1AXP2-201ENST00000555940 413 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC124856.1-201ENST00000600819 896 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC133552.5-201ENST00000604266 540 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 GMCL1P2-201ENST00000605230 823 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC239803.2-201ENST00000610161 430 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AP003400.2-201ENST00000624036 666 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 RLIMP2-201ENST00000427891 1563 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
TRIM49D1C9J1S8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.21□□□□□ -1.73
TRIM49D1C9J1S8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM49D1C9J1S8 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
TRIM49D1C9J1S8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-1320P-201ENST00000390838 107 ntBASIC4.21□□□□□ -1.74
TRIM49D1C9J1S8 RNU6-1269P-201ENST00000391139 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms