Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 UBA52P3-201ENST00000491303 382 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 HIGD1AP14-201ENST00000507617 282 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 COX6B1P5-201ENST00000509843 249 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC104115.2-201ENST00000523026 687 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 MORF4L1P3-201ENST00000525966 950 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC007225.2-201ENST00000562529 256 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 CYCSP40-201ENST00000575927 294 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AP000919.1-202ENST00000581139 1264 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AP005262.1-201ENST00000582646 997 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC005377.1-201ENST00000605126 456 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 MIR6768-201ENST00000610734 72 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AL353726.1-201ENST00000614041 1000 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC018926.3-201ENST00000618841 406 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 AP003072.4-201ENST00000624580 310 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AL592437.2-201ENST00000421655 2434 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 THAP12P4-201ENST00000528321 2266 ntBASIC3.97□□□□□ -1.77
SRRM4A7MD48 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SRRM4A7MD48 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.97□□□□□ -1.77
SRRM4A7MD48 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
SRRM4A7MD48 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
SRRM4A7MD48 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RNU4-44P-201ENST00000363050 141 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AL078599.1-201ENST00000402075 293 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 AL357515.1-201ENST00000402967 542 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 AP000534.2-201ENST00000412729 568 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AF186996.5-201ENST00000418098 904 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 PTMAP3-201ENST00000447474 330 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 PPIAP20-201ENST00000449839 135 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 FCF1P6-201ENST00000456841 595 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 RPL21P18-201ENST00000469899 480 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 RN7SL346P-201ENST00000491561 294 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 SNORD116-26-201ENST00000516006 96 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RN7SL622P-201ENST00000585292 275 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 BNIP3P4-201ENST00000604946 565 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC126544.2-201ENST00000625174 749 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 AC013437.2-201ENST00000639587 677 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.96□□□□□ -1.78
SRRM4A7MD48 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SRRM4A7MD48 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.96□□□□□ -1.78
SRRM4A7MD48 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms