Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCF1Q9UBD9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 FAM210CP-201ENST00000445714 574 ntBASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 NAPSB-206ENST00000562112 1266 ntBASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 CYP2D8P-201ENST00000433633 1490 ntBASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCF1Q9UBD9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 AC008040.2-201ENST00000461049 708 ntBASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 AC097488.1-201ENST00000507834 756 ntBASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 AC010947.1-201ENST00000623454 693 ntBASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCF1Q9UBD9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLCF1Q9UBD9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 AC091390.4-202ENST00000476426 537 ntBASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLCF1Q9UBD9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 LINC01521-201ENST00000504184 1943 ntBASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 FAM207BP-201ENST00000447172 505 ntBASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.25■□□□□ 0.35
CLCF1Q9UBD9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms