Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 MIR662-201ENST00000384847 95 ntBASIC18.6■□□□□ 0.57
SPTBN4Q9H254 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 AC211486.1-202ENST00000416371 468 ntBASIC18.6■□□□□ 0.57
SPTBN4Q9H254 AC211476.1-201ENST00000503899 468 ntBASIC18.6■□□□□ 0.57
SPTBN4Q9H254 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPTBN4Q9H254 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 TUBB8P6-201ENST00000436895 1288 ntBASIC18.59■□□□□ 0.57
SPTBN4Q9H254 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 AC145285.3-201ENST00000564603 959 ntBASIC18.59■□□□□ 0.57
SPTBN4Q9H254 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 AC011484.1-201ENST00000377652 1995 ntBASIC18.59■□□□□ 0.57
SPTBN4Q9H254 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 YBX2P1-201ENST00000394192 760 ntBASIC18.59■□□□□ 0.57
SPTBN4Q9H254 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.59■□□□□ 0.57
SPTBN4Q9H254 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPTBN4Q9H254 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.58■□□□□ 0.56
SPTBN4Q9H254 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPTBN4Q9H254 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 AC018712.1-201ENST00000455767 687 ntBASIC18.56■□□□□ 0.56
SPTBN4Q9H254 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 SPCS2P1-201ENST00000561636 679 ntBASIC18.56■□□□□ 0.56
SPTBN4Q9H254 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 KRT8P20-201ENST00000423953 1409 ntBASIC18.56■□□□□ 0.56
SPTBN4Q9H254 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.56■□□□□ 0.56
SPTBN4Q9H254 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPTBN4Q9H254 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms