Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-4Q9EQM3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-4Q9EQM3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-4Q9EQM3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx2-4Q9EQM3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Gm15920-201ENSMUST00000118998 402 ntBASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx2-4Q9EQM3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Gm11780-201ENSMUST00000136880 516 ntBASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nkx2-4Q9EQM3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Mir3113-201ENSMUST00000175478 76 ntBASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Gm5186-201ENSMUST00000218781 920 ntBASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx2-4Q9EQM3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-4Q9EQM3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-4Q9EQM3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-4Q9EQM3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx2-4Q9EQM3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Gm4459-201ENSMUST00000118750 468 ntBASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx2-4Q9EQM3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms