Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SUSD3Q96L08 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUSD3Q96L08 AC112907.3-201ENST00000577781 2400 ntBASIC20.61■□□□□ 0.89
SUSD3Q96L08 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.6■□□□□ 0.89
SUSD3Q96L08 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 AL137013.1-201ENST00000432946 1228 ntBASIC20.6■□□□□ 0.89
SUSD3Q96L08 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.6■□□□□ 0.89
SUSD3Q96L08 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUSD3Q96L08 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 SLC25A1P2-201ENST00000430693 912 ntBASIC20.59■□□□□ 0.89
SUSD3Q96L08 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 FAM87A-204ENST00000613235 858 ntBASIC20.59■□□□□ 0.89
SUSD3Q96L08 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.59■□□□□ 0.89
SUSD3Q96L08 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUSD3Q96L08 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SUSD3Q96L08 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 KRT18P57-201ENST00000443599 1254 ntBASIC20.58■□□□□ 0.89
SUSD3Q96L08 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SUSD3Q96L08 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SUSD3Q96L08 AC116562.4-202ENST00000641738 218 ntBASIC20.58■□□□□ 0.89
SUSD3Q96L08 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SUSD3Q96L08 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUSD3Q96L08 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SUSD3Q96L08 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUSD3Q96L08 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SUSD3Q96L08 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.58■□□□□ 0.88
SUSD3Q96L08 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 CCR12P-201ENST00000446203 998 ntBASIC20.57■□□□□ 0.88
SUSD3Q96L08 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 AC010203.1-204ENST00000548782 407 ntBASIC20.57■□□□□ 0.88
SUSD3Q96L08 CKBP1-201ENST00000565489 1086 ntBASIC20.57■□□□□ 0.88
SUSD3Q96L08 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
SUSD3Q96L08 AC104417.2-201ENST00000562989 1793 ntBASIC20.57■□□□□ 0.88
SUSD3Q96L08 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SUSD3Q96L08 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUSD3Q96L08 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUSD3Q96L08 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.56■□□□□ 0.88
SUSD3Q96L08 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SUSD3Q96L08 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms