Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 CNN2P6-201ENST00000439038 900 ntBASIC17.68■□□□□ 0.42
HPS1Q92902 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.68■□□□□ 0.42
HPS1Q92902 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.68■□□□□ 0.42
HPS1Q92902 AF201337.1-201ENST00000520239 748 ntBASIC17.68■□□□□ 0.42
HPS1Q92902 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
HPS1Q92902 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.67■□□□□ 0.42
HPS1Q92902 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.67■□□□□ 0.42
HPS1Q92902 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HPS1Q92902 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS1Q92902 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
HPS1Q92902 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HPS1Q92902 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 ABHD17AP1-201ENST00000358206 933 ntBASIC17.67■□□□□ 0.42
HPS1Q92902 AC073210.2-201ENST00000430369 194 ntBASIC17.67■□□□□ 0.42
HPS1Q92902 GUSBP6-202ENST00000438529 1198 ntBASIC17.67■□□□□ 0.42
HPS1Q92902 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.67■□□□□ 0.42
HPS1Q92902 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HPS1Q92902 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
HPS1Q92902 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS1Q92902 AC104581.1-202ENST00000635932 2618 ntBASIC17.67■□□□□ 0.42
HPS1Q92902 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 AC061975.6-201ENST00000579045 1553 ntBASIC17.66■□□□□ 0.42
HPS1Q92902 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HPS1Q92902 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HPS1Q92902 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS1Q92902 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS1Q92902 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS1Q92902 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS1Q92902 TERF1P5-201ENST00000477545 1207 ntBASIC17.66■□□□□ 0.42
HPS1Q92902 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS1Q92902 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.66■□□□□ 0.42
HPS1Q92902 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.66■□□□□ 0.42
HPS1Q92902 AC133041.1-202ENST00000642053 222 ntBASIC17.66■□□□□ 0.42
HPS1Q92902 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.66■□□□□ 0.42
HPS1Q92902 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS1Q92902 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS1Q92902 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HPS1Q92902 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS1Q92902 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HPS1Q92902 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HPS1Q92902 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 AC121338.2-201ENST00000622535 1744 ntBASIC17.65■□□□□ 0.42
HPS1Q92902 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HPS1Q92902 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 AC245052.3-201ENST00000450182 901 ntBASIC17.65■□□□□ 0.42
HPS1Q92902 AC007322.4-201ENST00000509611 723 ntBASIC17.65■□□□□ 0.42
HPS1Q92902 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HPS1Q92902 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPS1Q92902 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms