Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 SLC25A1P4-201ENST00000567977 778 ntBASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 AP000692.2-201ENST00000608391 879 ntBASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SH3RF2Q8TEC5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 KRT18P57-201ENST00000443599 1254 ntBASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 AC099778.1-201ENST00000568593 1911 ntBASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 AL691432.2-201ENST00000607222 2038 ntBASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SH3RF2Q8TEC5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AL137013.1-201ENST00000432946 1228 ntBASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3RF2Q8TEC5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 TERF1P1-201ENST00000311003 1181 ntBASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.15■□□□□ 0.82
SH3RF2Q8TEC5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 TSPY14P-201ENST00000303979 915 ntBASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 FAM207BP-201ENST00000447172 505 ntBASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 Z85996.1-201ENST00000494644 937 ntBASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 EGLN1P1-201ENST00000531623 762 ntBASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3RF2Q8TEC5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms