Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 AC141586.3-201ENST00000562166 1838 ntBASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 TEX21P-204ENST00000641479 1693 ntBASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.27■□□□□ 0.68
NUDCD3Q8IVD9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUDCD3Q8IVD9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUDCD3Q8IVD9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.27■□□□□ 0.67
NUDCD3Q8IVD9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
NUDCD3Q8IVD9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NUDCD3Q8IVD9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 CYP2T3P-201ENST00000601990 817 ntBASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUDCD3Q8IVD9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 AC018553.1-201ENST00000616682 1458 ntBASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 KRT18P11-201ENST00000435214 1283 ntBASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 NTF6G-201ENST00000591094 616 ntBASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUDCD3Q8IVD9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms