Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 AP002469.2-201ENST00000531724 424 ntBASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 AL662844.1-201ENST00000546340 181 ntBASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 AC117500.6-201ENST00000624871 588 ntBASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 LINC01465-201ENST00000408887 1940 ntBASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 KRT8P41-201ENST00000533985 1514 ntBASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 KRT8P26-201ENST00000534154 1276 ntBASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCRAQ6ISU1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AC244015.2-201ENST00000616358 1861 ntBASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 KRT18P13-201ENST00000400056 1290 ntBASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AL671883.3-201ENST00000603274 991 ntBASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AC120114.3-201ENST00000611923 658 ntBASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCRAQ6ISU1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 CHCHD2P8-201ENST00000429873 447 ntBASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms