Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 AC027601.4-201ENST00000611259 610 ntBASIC18.93■□□□□ 0.62
RIF1Q5UIP0 MIR2861-201ENST00000636310 90 ntBASIC18.93■□□□□ 0.62
RIF1Q5UIP0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.93■□□□□ 0.62
RIF1Q5UIP0 AC243591.1-201ENST00000452967 1364 ntBASIC18.93■□□□□ 0.62
RIF1Q5UIP0 C1orf229-201ENST00000623686 2258 ntBASIC18.93■□□□□ 0.62
RIF1Q5UIP0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 RNPS1P1-201ENST00000507437 918 ntBASIC18.92■□□□□ 0.62
RIF1Q5UIP0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 KRT8P26-201ENST00000534154 1276 ntBASIC18.92■□□□□ 0.62
RIF1Q5UIP0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 AL691403.2-201ENST00000618460 490 ntBASIC18.92■□□□□ 0.62
RIF1Q5UIP0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.92■□□□□ 0.62
RIF1Q5UIP0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 AC093525.10-201ENST00000625130 1569 ntBASIC18.91■□□□□ 0.62
RIF1Q5UIP0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 MIR662-201ENST00000384847 95 ntBASIC18.91■□□□□ 0.62
RIF1Q5UIP0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.91■□□□□ 0.62
RIF1Q5UIP0 AP001005.1-201ENST00000571755 1248 ntBASIC18.91■□□□□ 0.62
RIF1Q5UIP0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RIF1Q5UIP0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RIF1Q5UIP0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.89■□□□□ 0.62
RIF1Q5UIP0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RIF1Q5UIP0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.89■□□□□ 0.61
RIF1Q5UIP0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 MIR940-201ENST00000401276 94 ntBASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.89■□□□□ 0.61
RIF1Q5UIP0 AF238378.1-201ENST00000526806 358 ntBASIC18.89■□□□□ 0.61
RIF1Q5UIP0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms