Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
HMGXB3Q12766 AP001271.2-201ENST00000624018 1556 ntBASIC34.33■■■■□ 3.09
HMGXB3Q12766 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC34.33■■■■□ 3.09
HMGXB3Q12766 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 KRT8P26-201ENST00000534154 1276 ntBASIC34.33■■■■□ 3.09
HMGXB3Q12766 BMF-207ENST00000559701 630 ntTSL 3 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 CIB2-208ENST00000560618 804 ntTSL 2 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
HMGXB3Q12766 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC34.33■■■■□ 3.09
HMGXB3Q12766 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
HMGXB3Q12766 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
HMGXB3Q12766 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
HMGXB3Q12766 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 DRAXINP1-201ENST00000437611 948 ntBASIC34.32■■■■□ 3.08
HMGXB3Q12766 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
HMGXB3Q12766 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC34.32■■■■□ 3.08
HMGXB3Q12766 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC34.32■■■■□ 3.08
HMGXB3Q12766 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC34.31■■■■□ 3.08
HMGXB3Q12766 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
HMGXB3Q12766 BID-203ENST00000399765 1879 ntTSL 2 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 MPI-205ENST00000562606 1052 ntTSL 3 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
HMGXB3Q12766 FP700111.2-201ENST00000619190 1892 ntBASIC34.3■■■■□ 3.08
HMGXB3Q12766 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
HMGXB3Q12766 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
HMGXB3Q12766 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 GXYLT1P4-201ENST00000613576 1192 ntBASIC34.3■■■■□ 3.08
HMGXB3Q12766 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC34.3■■■■□ 3.08
HMGXB3Q12766 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC34.29■■■■□ 3.08
HMGXB3Q12766 AL162741.1-201ENST00000565563 1558 ntBASIC34.29■■■■□ 3.08
HMGXB3Q12766 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC34.29■■■■□ 3.08
HMGXB3Q12766 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 AC012615.1-201ENST00000565797 1299 ntBASIC34.29■■■■□ 3.08
HMGXB3Q12766 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC34.29■■■■□ 3.08
HMGXB3Q12766 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
HMGXB3Q12766 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
HMGXB3Q12766 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
HMGXB3Q12766 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
HMGXB3Q12766 AL117328.2-201ENST00000624617 1940 ntBASIC34.27■■■■□ 3.08
HMGXB3Q12766 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC34.27■■■■□ 3.08
HMGXB3Q12766 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC34.27■■■■□ 3.08
HMGXB3Q12766 HLA-F-220ENST00000434407 884 ntBASIC34.27■■■■□ 3.08
HMGXB3Q12766 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC34.27■■■■□ 3.08
HMGXB3Q12766 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
HMGXB3Q12766 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
HMGXB3Q12766 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC34.27■■■■□ 3.08
HMGXB3Q12766 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC34.26■■■■□ 3.08
HMGXB3Q12766 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms