Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL12P48061 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.39■□□□□ 0.69
CXCL12P48061 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.39■□□□□ 0.69
CXCL12P48061 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.39■□□□□ 0.69
CXCL12P48061 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CXCL12P48061 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCL12P48061 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL12P48061 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCL12P48061 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CXCL12P48061 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CXCL12P48061 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCL12P48061 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.38■□□□□ 0.69
CXCL12P48061 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCL12P48061 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CXCL12P48061 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.38■□□□□ 0.69
CXCL12P48061 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CXCL12P48061 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CXCL12P48061 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.38■□□□□ 0.69
CXCL12P48061 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.38■□□□□ 0.69
CXCL12P48061 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CXCL12P48061 AF106564.1-201ENST00000607058 2553 ntBASIC19.38■□□□□ 0.69
CXCL12P48061 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCL12P48061 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.37■□□□□ 0.69
CXCL12P48061 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.37■□□□□ 0.69
CXCL12P48061 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CXCL12P48061 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.37■□□□□ 0.69
CXCL12P48061 MIR3652-201ENST00000579335 131 ntBASIC19.37■□□□□ 0.69
CXCL12P48061 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CXCL12P48061 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCL12P48061 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CXCL12P48061 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCL12P48061 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 AP001271.2-201ENST00000624018 1556 ntBASIC19.36■□□□□ 0.69
CXCL12P48061 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.36■□□□□ 0.69
CXCL12P48061 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CXCL12P48061 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.36■□□□□ 0.69
CXCL12P48061 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCL12P48061 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.36■□□□□ 0.69
CXCL12P48061 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.36■□□□□ 0.69
CXCL12P48061 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCL12P48061 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CXCL12P48061 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCL12P48061 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCL12P48061 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CXCL12P48061 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.35■□□□□ 0.69
CXCL12P48061 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CXCL12P48061 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.35■□□□□ 0.69
CXCL12P48061 TSPY21P-201ENST00000433481 731 ntBASIC19.35■□□□□ 0.69
CXCL12P48061 TSPY23P-201ENST00000440136 739 ntBASIC19.35■□□□□ 0.69
CXCL12P48061 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.35■□□□□ 0.69
CXCL12P48061 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CXCL12P48061 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.35■□□□□ 0.69
CXCL12P48061 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.35■□□□□ 0.69
CXCL12P48061 PRELID1P1-202ENST00000567272 903 ntBASIC19.35■□□□□ 0.69
CXCL12P48061 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CXCL12P48061 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.35■□□□□ 0.69
CXCL12P48061 AC092119.3-201ENST00000612618 583 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms