Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
RXRBP28702 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.58■■□□□ 1.68
RXRBP28702 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
RXRBP28702 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.57■■□□□ 1.68
RXRBP28702 HTR5BP-201ENST00000430851 1154 ntBASIC25.57■■□□□ 1.68
RXRBP28702 RPL13AP23-201ENST00000480739 586 ntBASIC25.57■■□□□ 1.68
RXRBP28702 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC25.57■■□□□ 1.68
RXRBP28702 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.57■■□□□ 1.68
RXRBP28702 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC25.57■■□□□ 1.68
RXRBP28702 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RXRBP28702 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.56■■□□□ 1.68
RXRBP28702 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
RXRBP28702 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 AC093909.1-201ENST00000504731 1122 ntBASIC25.56■■□□□ 1.68
RXRBP28702 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
RXRBP28702 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 RPL18-209ENST00000550645 463 ntTSL 5 BASIC25.56■■□□□ 1.68
RXRBP28702 RPL18-214ENST00000552588 559 ntTSL 3 BASIC25.56■■□□□ 1.68
RXRBP28702 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.56■■□□□ 1.68
RXRBP28702 MIR4674-201ENST00000582457 87 ntBASIC25.56■■□□□ 1.68
RXRBP28702 AL117328.2-201ENST00000624617 1940 ntBASIC25.56■■□□□ 1.68
RXRBP28702 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.56■■□□□ 1.68
RXRBP28702 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RXRBP28702 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.56■■□□□ 1.68
RXRBP28702 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.56■■□□□ 1.68
RXRBP28702 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.56■■□□□ 1.68
RXRBP28702 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RXRBP28702 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RXRBP28702 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.55■■□□□ 1.68
RXRBP28702 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RXRBP28702 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.54■■□□□ 1.68
RXRBP28702 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.54■■□□□ 1.68
RXRBP28702 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.54■■□□□ 1.68
RXRBP28702 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.54■■□□□ 1.68
RXRBP28702 MED22-202ENST00000371999 987 ntTSL 3 BASIC25.54■■□□□ 1.68
RXRBP28702 UPF3AP3-201ENST00000420996 769 ntBASIC25.54■■□□□ 1.68
RXRBP28702 RPS8P6-201ENST00000426177 609 ntBASIC25.54■■□□□ 1.68
RXRBP28702 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC25.54■■□□□ 1.68
RXRBP28702 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.54■■□□□ 1.68
RXRBP28702 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.54■■□□□ 1.68
RXRBP28702 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC25.54■■□□□ 1.68
RXRBP28702 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RXRBP28702 ZNF259P1-201ENST00000407656 1365 ntBASIC25.54■■□□□ 1.68
RXRBP28702 AC243591.1-201ENST00000452967 1364 ntBASIC25.54■■□□□ 1.68
RXRBP28702 KRT16P6-202ENST00000425692 1426 ntBASIC25.54■■□□□ 1.68
RXRBP28702 LINC00167-201ENST00000530583 1419 ntBASIC25.54■■□□□ 1.68
RXRBP28702 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RXRBP28702 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RXRBP28702 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RXRBP28702 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RXRBP28702 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC25.53■■□□□ 1.68
RXRBP28702 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.53■■□□□ 1.68
RXRBP28702 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
RXRBP28702 MIR662-201ENST00000384847 95 ntBASIC25.53■■□□□ 1.68
RXRBP28702 HLA-F-220ENST00000434407 884 ntBASIC25.53■■□□□ 1.68
RXRBP28702 PGAM5P1-201ENST00000518923 814 ntBASIC25.53■■□□□ 1.68
RXRBP28702 AC079602.3-201ENST00000623931 403 ntBASIC25.53■■□□□ 1.68
RXRBP28702 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RXRBP28702 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.53■■□□□ 1.68
RXRBP28702 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
RXRBP28702 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC25.53■■□□□ 1.68
RXRBP28702 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RXRBP28702 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.52■■□□□ 1.68
RXRBP28702 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 ECEL1P1-201ENST00000373592 1742 ntBASIC25.52■■□□□ 1.68
RXRBP28702 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC25.52■■□□□ 1.68
RXRBP28702 AC009065.1-201ENST00000564055 1225 ntBASIC25.52■■□□□ 1.68
RXRBP28702 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.52■■□□□ 1.68
RXRBP28702 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC25.52■■□□□ 1.68
RXRBP28702 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.52■■□□□ 1.68
RXRBP28702 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RXRBP28702 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.52■■□□□ 1.68
RXRBP28702 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RXRBP28702 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RXRBP28702 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.52■■□□□ 1.68
RXRBP28702 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.51■■□□□ 1.68
RXRBP28702 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.51■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms