Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AC007322.1-201ENST00000426983 750 ntBASIC18.74■□□□□ 0.59
LINGO3P0C6S8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AL162412.1-201ENST00000567129 965 ntBASIC18.74■□□□□ 0.59
LINGO3P0C6S8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AIRN-201ENST00000601203 4374 ntBASIC18.74■□□□□ 0.59
LINGO3P0C6S8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 AC068338.2-201ENST00000563278 1430 ntBASIC18.74■□□□□ 0.59
LINGO3P0C6S8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINGO3P0C6S8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 AC067852.2-201ENST00000590513 2313 ntBASIC18.72■□□□□ 0.59
LINGO3P0C6S8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.72■□□□□ 0.59
LINGO3P0C6S8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINGO3P0C6S8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINGO3P0C6S8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms