Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.68■■□□□ 1.7
COL5A2P05997 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL5A2P05997 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.68■■□□□ 1.7
COL5A2P05997 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
COL5A2P05997 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
COL5A2P05997 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 RN7SL510P-201ENST00000581311 263 ntBASIC25.67■■□□□ 1.7
COL5A2P05997 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.67■■□□□ 1.7
COL5A2P05997 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.67■■□□□ 1.7
COL5A2P05997 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.67■■□□□ 1.7
COL5A2P05997 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.67■■□□□ 1.7
COL5A2P05997 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL5A2P05997 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25.66■■□□□ 1.7
COL5A2P05997 SDHD-206ENST00000528182 754 ntTSL 3 BASIC25.66■■□□□ 1.7
COL5A2P05997 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC25.66■■□□□ 1.7
COL5A2P05997 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.66■■□□□ 1.7
COL5A2P05997 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
COL5A2P05997 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL5A2P05997 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
COL5A2P05997 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
COL5A2P05997 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC25.66■■□□□ 1.7
COL5A2P05997 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC25.66■■□□□ 1.7
COL5A2P05997 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL5A2P05997 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.66■■□□□ 1.7
COL5A2P05997 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC25.66■■□□□ 1.7
COL5A2P05997 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.65■■□□□ 1.7
COL5A2P05997 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC25.65■■□□□ 1.7
COL5A2P05997 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC25.65■■□□□ 1.7
COL5A2P05997 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25.65■■□□□ 1.7
COL5A2P05997 PRELID1P1-202ENST00000567272 903 ntBASIC25.65■■□□□ 1.7
COL5A2P05997 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC25.65■■□□□ 1.7
COL5A2P05997 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC25.65■■□□□ 1.7
COL5A2P05997 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
COL5A2P05997 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL5A2P05997 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.64■■□□□ 1.7
COL5A2P05997 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.64■■□□□ 1.7
COL5A2P05997 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL5A2P05997 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC25.64■■□□□ 1.7
COL5A2P05997 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL5A2P05997 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC25.64■■□□□ 1.69
COL5A2P05997 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC25.64■■□□□ 1.69
COL5A2P05997 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.64■■□□□ 1.69
COL5A2P05997 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.64■■□□□ 1.69
COL5A2P05997 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL5A2P05997 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.64■■□□□ 1.69
COL5A2P05997 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC25.64■■□□□ 1.69
COL5A2P05997 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.64■■□□□ 1.69
COL5A2P05997 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
COL5A2P05997 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC25.63■■□□□ 1.69
COL5A2P05997 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
COL5A2P05997 MIR3180-1-201ENST00000580374 94 ntBASIC25.63■■□□□ 1.69
COL5A2P05997 MIR3180-3-201ENST00000584616 94 ntBASIC25.63■■□□□ 1.69
COL5A2P05997 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
COL5A2P05997 CR769767.2-201ENST00000622735 460 ntBASIC25.63■■□□□ 1.69
COL5A2P05997 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL5A2P05997 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.62■■□□□ 1.69
COL5A2P05997 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC25.62■■□□□ 1.69
COL5A2P05997 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.62■■□□□ 1.69
COL5A2P05997 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC25.62■■□□□ 1.69
COL5A2P05997 AP000347.1-202ENST00000435868 847 ntBASIC25.62■■□□□ 1.69
COL5A2P05997 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.62■■□□□ 1.69
COL5A2P05997 KLK8-205ENST00000593490 267 ntTSL 3 BASIC25.62■■□□□ 1.69
COL5A2P05997 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
COL5A2P05997 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.62■■□□□ 1.69
COL5A2P05997 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms