Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN1O95832 AC069148.1-201ENST00000608741 768 ntBASIC17.34■□□□□ 0.37
CLDN1O95832 AC116407.4-201ENST00000623319 1061 ntBASIC17.34■□□□□ 0.37
CLDN1O95832 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN1O95832 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN1O95832 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN1O95832 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLDN1O95832 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN1O95832 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLDN1O95832 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN1O95832 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.33■□□□□ 0.36
CLDN1O95832 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN1O95832 AC004980.1-204ENST00000429707 299 ntBASIC17.33■□□□□ 0.36
CLDN1O95832 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN1O95832 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN1O95832 AC141257.4-201ENST00000634557 245 ntBASIC17.33■□□□□ 0.36
CLDN1O95832 AC136944.6-201ENST00000634818 245 ntBASIC17.33■□□□□ 0.36
CLDN1O95832 AC116562.4-202ENST00000641738 218 ntBASIC17.33■□□□□ 0.36
CLDN1O95832 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN1O95832 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN1O95832 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN1O95832 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN1O95832 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN1O95832 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 AL359075.1-203ENST00000462729 1002 ntBASIC17.32■□□□□ 0.36
CLDN1O95832 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN1O95832 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.32■□□□□ 0.36
CLDN1O95832 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN1O95832 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN1O95832 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN1O95832 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN1O95832 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN1O95832 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN1O95832 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN1O95832 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN1O95832 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN1O95832 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 AIRN-201ENST00000601203 4374 ntBASIC17.31■□□□□ 0.36
CLDN1O95832 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 PVRIG2P-201ENST00000435460 978 ntBASIC17.31■□□□□ 0.36
CLDN1O95832 AP000347.1-202ENST00000435868 847 ntBASIC17.31■□□□□ 0.36
CLDN1O95832 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.31■□□□□ 0.36
CLDN1O95832 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN1O95832 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.31■□□□□ 0.36
CLDN1O95832 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN1O95832 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN1O95832 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN1O95832 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLDN1O95832 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN1O95832 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN1O95832 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN1O95832 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN1O95832 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN1O95832 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms