Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1BO75841 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1BO75841 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.96■□□□□ 0.3
UPK1BO75841 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1BO75841 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.96■□□□□ 0.3
UPK1BO75841 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
UPK1BO75841 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
UPK1BO75841 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
UPK1BO75841 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1BO75841 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPK1BO75841 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
UPK1BO75841 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UPK1BO75841 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
UPK1BO75841 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.95■□□□□ 0.3
UPK1BO75841 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPK1BO75841 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UPK1BO75841 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1BO75841 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1BO75841 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1BO75841 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 SYT6-210ENST00000641643 1587 ntBASIC16.94■□□□□ 0.3
UPK1BO75841 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UPK1BO75841 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK1BO75841 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK1BO75841 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1BO75841 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 BX664725.1-201ENST00000438252 379 ntBASIC16.94■□□□□ 0.3
UPK1BO75841 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
UPK1BO75841 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
UPK1BO75841 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1BO75841 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 GNAS-203ENST00000306120 1878 ntBASIC16.94■□□□□ 0.3
UPK1BO75841 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1BO75841 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UPK1BO75841 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK1BO75841 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.93■□□□□ 0.3
UPK1BO75841 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UPK1BO75841 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UPK1BO75841 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 AC053503.5-201ENST00000601508 636 ntBASIC16.93■□□□□ 0.3
UPK1BO75841 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UPK1BO75841 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
UPK1BO75841 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UPK1BO75841 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UPK1BO75841 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.93■□□□□ 0.3
UPK1BO75841 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms