Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.76■■□□□ 1.39
GRIN3BO60391 BX842568.4-201ENST00000421222 227 ntBASIC23.76■■□□□ 1.39
GRIN3BO60391 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.76■■□□□ 1.39
GRIN3BO60391 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.76■■□□□ 1.39
GRIN3BO60391 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
GRIN3BO60391 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.76■■□□□ 1.39
GRIN3BO60391 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.76■■□□□ 1.39
GRIN3BO60391 AP001005.1-201ENST00000571755 1248 ntBASIC23.76■■□□□ 1.39
GRIN3BO60391 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
GRIN3BO60391 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.76■■□□□ 1.39
GRIN3BO60391 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 PMS2P7-201ENST00000506558 1336 ntBASIC23.76■■□□□ 1.39
GRIN3BO60391 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.76■■□□□ 1.39
GRIN3BO60391 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.75■■□□□ 1.39
GRIN3BO60391 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
GRIN3BO60391 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
GRIN3BO60391 AL139424.1-201ENST00000607572 797 ntBASIC23.75■■□□□ 1.39
GRIN3BO60391 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.75■■□□□ 1.39
GRIN3BO60391 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.75■■□□□ 1.39
GRIN3BO60391 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 KRT16P6-202ENST00000425692 1426 ntBASIC23.75■■□□□ 1.39
GRIN3BO60391 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRIN3BO60391 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
GRIN3BO60391 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.74■■□□□ 1.39
GRIN3BO60391 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 AL162741.1-201ENST00000565563 1558 ntBASIC23.74■■□□□ 1.39
GRIN3BO60391 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.74■■□□□ 1.39
GRIN3BO60391 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.74■■□□□ 1.39
GRIN3BO60391 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
GRIN3BO60391 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.74■■□□□ 1.39
GRIN3BO60391 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.74■■□□□ 1.39
GRIN3BO60391 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRIN3BO60391 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
GRIN3BO60391 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.73■■□□□ 1.39
GRIN3BO60391 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GRIN3BO60391 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GRIN3BO60391 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GRIN3BO60391 AC005104.2-201ENST00000427818 678 ntBASIC23.73■■□□□ 1.39
GRIN3BO60391 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.73■■□□□ 1.39
GRIN3BO60391 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.73■■□□□ 1.39
GRIN3BO60391 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
GRIN3BO60391 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.73■■□□□ 1.39
GRIN3BO60391 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GRIN3BO60391 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.73■■□□□ 1.39
GRIN3BO60391 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.72■■□□□ 1.39
GRIN3BO60391 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 SLC25A1P1-201ENST00000528351 927 ntBASIC23.72■■□□□ 1.39
GRIN3BO60391 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.72■■□□□ 1.39
GRIN3BO60391 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.72■■□□□ 1.39
GRIN3BO60391 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.72■■□□□ 1.39
GRIN3BO60391 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRIN3BO60391 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.71■■□□□ 1.39
GRIN3BO60391 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.71■■□□□ 1.39
GRIN3BO60391 TSPY22P-201ENST00000427496 604 ntBASIC23.71■■□□□ 1.39
GRIN3BO60391 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.71■■□□□ 1.39
GRIN3BO60391 TOB2P1-201ENST00000469761 992 ntBASIC23.71■■□□□ 1.39
GRIN3BO60391 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.71■■□□□ 1.39
GRIN3BO60391 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.71■■□□□ 1.39
GRIN3BO60391 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GRIN3BO60391 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms