Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP2AO43633 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP2AO43633 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP2AO43633 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP2AO43633 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP2AO43633 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.88■■□□□ 1.09
CHMP2AO43633 AP003071.4-201ENST00000562276 1284 ntBASIC21.88■■□□□ 1.09
CHMP2AO43633 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CHMP2AO43633 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP2AO43633 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP2AO43633 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CHMP2AO43633 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHMP2AO43633 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.87■■□□□ 1.09
CHMP2AO43633 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP2AO43633 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.87■■□□□ 1.09
CHMP2AO43633 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.87■■□□□ 1.09
CHMP2AO43633 AL445675.2-201ENST00000620291 557 ntBASIC21.87■■□□□ 1.09
CHMP2AO43633 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP2AO43633 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.87■■□□□ 1.09
CHMP2AO43633 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP2AO43633 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CHMP2AO43633 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CHMP2AO43633 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 KRT17P2-201ENST00000300992 1314 ntBASIC21.86■■□□□ 1.09
CHMP2AO43633 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CHMP2AO43633 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP2AO43633 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP2AO43633 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.86■■□□□ 1.09
CHMP2AO43633 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CHMP2AO43633 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 AL355075.4-201ENST00000554988 638 ntBASIC21.86■■□□□ 1.09
CHMP2AO43633 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.86■■□□□ 1.09
CHMP2AO43633 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHMP2AO43633 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CHMP2AO43633 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP2AO43633 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.86■■□□□ 1.09
CHMP2AO43633 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.85■■□□□ 1.09
CHMP2AO43633 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.85■■□□□ 1.09
CHMP2AO43633 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 NUDT16P1-203ENST00000513809 620 ntBASIC21.85■■□□□ 1.09
CHMP2AO43633 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.85■■□□□ 1.09
CHMP2AO43633 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.85■■□□□ 1.09
CHMP2AO43633 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHMP2AO43633 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.84■■□□□ 1.09
CHMP2AO43633 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.84■■□□□ 1.09
CHMP2AO43633 AC004980.1-204ENST00000429707 299 ntBASIC21.84■■□□□ 1.09
CHMP2AO43633 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.84■■□□□ 1.09
CHMP2AO43633 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHMP2AO43633 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.84■■□□□ 1.09
CHMP2AO43633 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.84■■□□□ 1.09
CHMP2AO43633 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms