Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX1O00570 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.74■□□□□ 0.91
SOX1O00570 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX1O00570 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 MIR3197-201ENST00000582241 73 ntBASIC20.73■□□□□ 0.91
SOX1O00570 AP001160.2-201ENST00000596071 487 ntBASIC20.73■□□□□ 0.91
SOX1O00570 AL773604.1-201ENST00000617417 272 ntBASIC20.73■□□□□ 0.91
SOX1O00570 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.73■□□□□ 0.91
SOX1O00570 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX1O00570 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.72■□□□□ 0.91
SOX1O00570 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SOX1O00570 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 AC244107.1-201ENST00000442033 332 ntBASIC20.72■□□□□ 0.91
SOX1O00570 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.72■□□□□ 0.91
SOX1O00570 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.72■□□□□ 0.91
SOX1O00570 RNPS1P1-201ENST00000507437 918 ntBASIC20.72■□□□□ 0.91
SOX1O00570 AF238378.1-201ENST00000526806 358 ntBASIC20.72■□□□□ 0.91
SOX1O00570 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.72■□□□□ 0.91
SOX1O00570 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.72■□□□□ 0.91
SOX1O00570 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.72■□□□□ 0.91
SOX1O00570 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SOX1O00570 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.72■□□□□ 0.91
SOX1O00570 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOX1O00570 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
SOX1O00570 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.71■□□□□ 0.91
SOX1O00570 AC104819.1-201ENST00000504587 486 ntBASIC20.71■□□□□ 0.91
SOX1O00570 AC034232.1-201ENST00000506026 1064 ntBASIC20.71■□□□□ 0.91
SOX1O00570 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.71■□□□□ 0.91
SOX1O00570 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 MIR4674-201ENST00000582457 87 ntBASIC20.71■□□□□ 0.91
SOX1O00570 AC064862.7-201ENST00000604520 867 ntBASIC20.71■□□□□ 0.91
SOX1O00570 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.71■□□□□ 0.91
SOX1O00570 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOX1O00570 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOX1O00570 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOX1O00570 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.7■□□□□ 0.9
SOX1O00570 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOX1O00570 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SOX1O00570 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SOX1O00570 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.7■□□□□ 0.9
SOX1O00570 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.7■□□□□ 0.9
SOX1O00570 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOX1O00570 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SOX1O00570 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
SOX1O00570 AC243591.1-201ENST00000452967 1364 ntBASIC20.7■□□□□ 0.9
SOX1O00570 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.69■□□□□ 0.9
SOX1O00570 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX1O00570 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
SOX1O00570 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX1O00570 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.69■□□□□ 0.9
SOX1O00570 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX1O00570 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX1O00570 AL031284.1-201ENST00000419297 478 ntBASIC20.69■□□□□ 0.9
SOX1O00570 SAPCD2P3-201ENST00000455031 850 ntBASIC20.69■□□□□ 0.9
SOX1O00570 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.69■□□□□ 0.9
SOX1O00570 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.69■□□□□ 0.9
SOX1O00570 AL390719.2-201ENST00000606993 987 ntBASIC20.69■□□□□ 0.9
SOX1O00570 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.69■□□□□ 0.9
SOX1O00570 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOX1O00570 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.68■□□□□ 0.9
SOX1O00570 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms