Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR7702-201ENST00000621931 59 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 MIR6830-201ENST00000636015 70 ntBASIC4.45□□□□□ -1.7
CISHQ9NSE2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CISHQ9NSE2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CISHQ9NSE2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.45□□□□□ -1.7
CISHQ9NSE2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 SNORA62-201ENST00000365493 153 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 RPS27AP11-201ENST00000402798 447 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 AL590806.1-201ENST00000415818 853 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 AC234781.4-201ENST00000419384 244 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 NPM1P33-201ENST00000438918 872 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 RPL10P17-201ENST00000453852 316 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 RAD23BP3-201ENST00000454157 1152 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 MIR6716-201ENST00000613413 80 ntBASIC4.44□□□□□ -1.7
CISHQ9NSE2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CISHQ9NSE2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CISHQ9NSE2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 TTC39DP-201ENST00000416781 1688 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AMZ2P2-201ENST00000406819 1057 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 COX6CP15-201ENST00000426313 211 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC006011.1-201ENST00000442758 349 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 IFITM8P-201ENST00000522529 394 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC074140.1-201ENST00000621617 208 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 OR52H1-202ENST00000641796 1061 ntBASIC4.43□□□□□ -1.7
CISHQ9NSE2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CISHQ9NSE2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.43□□□□□ -1.7
CISHQ9NSE2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CISHQ9NSE2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CISHQ9NSE2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CISHQ9NSE2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CISHQ9NSE2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 AC068538.1-201ENST00000376856 336 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 RN7SKP33-201ENST00000410942 340 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 RNU2-22P-201ENST00000411266 212 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 OR6C64P-201ENST00000419708 825 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 RN7SL585P-201ENST00000470538 280 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 NPM1P29-201ENST00000483112 803 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 SNORA31.9-201ENST00000516429 84 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 MRPL49P2-201ENST00000521066 465 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 OR7E10P-201ENST00000526420 991 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.42□□□□□ -1.7
CISHQ9NSE2 RN7SL600P-201ENST00000581811 299 ntBASIC4.42□□□□□ -1.7
CISHQ9NSE2 ELOCP28-201ENST00000590044 317 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms