Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC098935.2-201ENST00000604222 466 ntBASIC5.32□□□□□ -1.56
UPF2Q9HAU5 AC016542.1-201ENST00000608259 493 ntBASIC5.32□□□□□ -1.56
UPF2Q9HAU5 AC233309.1-201ENST00000619522 751 ntBASIC5.32□□□□□ -1.56
UPF2Q9HAU5 AP001005.3-201ENST00000622049 129 ntBASIC5.32□□□□□ -1.56
UPF2Q9HAU5 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.32□□□□□ -1.56
UPF2Q9HAU5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPF2Q9HAU5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 C4BPAP1-201ENST00000415474 1893 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AL590240.1-201ENST00000334118 313 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 RAB9AP4-201ENST00000415230 609 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC108145.1-201ENST00000503770 153 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC147055.3-201ENST00000510547 851 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AF186190.1-201ENST00000517470 480 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AP001804.2-201ENST00000533932 910 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC012414.2-201ENST00000559474 187 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AL512506.1-201ENST00000613918 449 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 OR2L1P-202ENST00000641567 1023 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC018529.3-201ENST00000624212 2254 ntBASIC5.31□□□□□ -1.56
UPF2Q9HAU5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UPF2Q9HAU5 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 CIR1P2-201ENST00000514821 1342 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 MTND2P9-201ENST00000422293 931 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 EIF1P3-201ENST00000423841 334 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 RPL17P35-201ENST00000432217 549 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 PA2G4P6-201ENST00000438325 1197 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 YWHAZP2-201ENST00000440317 728 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC114495.1-201ENST00000441274 436 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC006517.1-201ENST00000480485 328 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 RN7SL629P-201ENST00000489622 285 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 ATG10-AS1-201ENST00000504846 648 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC139783.2-201ENST00000504847 1145 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC112206.4-201ENST00000515142 405 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AL512624.1-201ENST00000613638 469 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 MIR7702-201ENST00000621931 59 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC138907.10-201ENST00000623708 983 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC008785.1-201ENST00000624475 456 ntBASIC5.3□□□□□ -1.56
UPF2Q9HAU5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPF2Q9HAU5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SDAD1P1-202ENST00000524156 2051 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SNORD66.1-201ENST00000391230 76 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 RNU4-34P-201ENST00000410431 124 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SNORA79B-201ENST00000410557 148 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.29□□□□□ -1.56
UPF2Q9HAU5 MTCO1P57-201ENST00000432182 261 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 GSTA7P-201ENST00000438425 448 ntBASIC5.29□□□□□ -1.56
UPF2Q9HAU5 HMGB3P9-201ENST00000441799 583 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms