Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 uc_338.13-201ENST00000618243 179 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RPAP1Q9BWH6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 RNU1-94P-201ENST00000362627 173 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 ARAFP1-201ENST00000422172 605 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 HSFY6P-201ENST00000445573 403 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 EEF1A1P1-201ENST00000447052 739 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 DDX39BP2-208ENST00000453923 258 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC105137.1-201ENST00000484355 562 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP360-201ENST00000516555 118 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC005034.4-201ENST00000603612 899 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AL160290.3-201ENST00000604869 165 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 MIR92B-201ENST00000607575 96 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC007546.2-201ENST00000623996 360 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AP003497.2-201ENST00000624220 967 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 AC034229.5-201ENST00000624258 185 ntBASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.3□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP22-201ENST00000365393 109 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 PPIAP31-201ENST00000405422 495 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 UBTFL3-201ENST00000418934 1024 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 MAPRE1P3-201ENST00000435438 796 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 UBTFL6-201ENST00000477929 1024 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RPL35P6-201ENST00000490024 372 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RN7SL812P-201ENST00000493791 279 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RN7SL691P-201ENST00000494487 301 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC008694.2-201ENST00000517591 306 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 KCTD9P6-201ENST00000522306 950 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 MTND6P33-201ENST00000571794 183 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC008759.1-201ENST00000589783 983 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RNA5SP196-201ENST00000625967 102 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AL139254.3-201ENST00000641097 674 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC138627.1-204ENST00000641894 765 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RNU1-108P-201ENST00000362556 161 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 RNU1-132P-201ENST00000364300 164 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AL583835.1-201ENST00000399570 407 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AL078604.1-201ENST00000404609 466 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AL445189.1-201ENST00000405722 338 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 SNORA11F-201ENST00000408237 128 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 CBX1P3-201ENST00000413296 527 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 BTF3P10-201ENST00000433415 495 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 TMX2P1-201ENST00000436507 708 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms