Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DHFRP6-201ENST00000401776 268 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 BTBD10P2-201ENST00000404779 676 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL096800.1-201ENST00000405326 893 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL023284.3-201ENST00000407767 334 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 Y_RNA.598-201ENST00000410480 95 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RN7SKP240-201ENST00000410583 375 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 COX6CP17-201ENST00000421389 185 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL157884.1-201ENST00000424561 454 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC112492.2-201ENST00000432774 1030 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OR2B8P-201ENST00000432841 938 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 PNKDP1-201ENST00000435914 430 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL512605.1-202ENST00000441919 381 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL645936.1-201ENST00000441979 518 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 HMGN1P2-201ENST00000445197 310 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC104073.1-201ENST00000451988 151 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RNA5SP206-201ENST00000516703 121 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 COX6B1P4-201ENST00000519826 484 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC127381.1-201ENST00000555979 939 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MIR544B-201ENST00000582372 78 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC090616.1-201ENST00000583895 447 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 BNIP3P8-201ENST00000597863 560 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC007566.2-201ENST00000603642 413 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC090948.2-201ENST00000607363 564 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL357080.1-201ENST00000617394 239 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC073968.1-201ENST00000618594 637 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AC073488.6-201ENST00000632293 754 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OR55B1P-203ENST00000641518 2602 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 AL139384.2-201ENST00000613809 3590 ntBASIC6.97□□□□□ -1.29
TRAIPQ9BWF2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRAIPQ9BWF2 DOCK11P1-201ENST00000553480 5932 ntBASIC6.96□□□□□ -1.29
TRAIPQ9BWF2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
TRAIPQ9BWF2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRAIPQ9BWF2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.96□□□□□ -1.29
TRAIPQ9BWF2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 OR9G4-201ENST00000302957 984 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 RNA5SP188-201ENST00000362916 129 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 HMGN1P14-201ENST00000412459 517 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 USP9YP13-201ENST00000417797 480 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 RPL30P3-201ENST00000424262 333 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 IGLV3-4-201ENST00000432300 244 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL590004.3-202ENST00000445883 451 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL033528.1-201ENST00000453780 140 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 HIGD1AP8-201ENST00000453927 274 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 RN7SL369P-201ENST00000477138 299 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AP002453.1-201ENST00000492327 668 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 OR4D12P-201ENST00000509361 911 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC034159.1-201ENST00000513885 583 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 TPM3P3-201ENST00000521343 354 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 OR5AP1P-201ENST00000529730 940 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC092470.1-201ENST00000546187 132 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.96□□□□□ -1.3
TRAIPQ9BWF2 AC012254.3-201ENST00000591183 2117 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms