Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPL21P12-201ENST00000559810 515 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 AC055839.1-201ENST00000634467 498 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.49□□□□□ -1.53
ABCA3Q99758 ZNF402P-201ENST00000404435 3100 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.49□□□□□ -1.53
ABCA3Q99758 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ABCA3Q99758 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.49□□□□□ -1.53
ABCA3Q99758 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 RNU1-44P-201ENST00000384453 163 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCA3Q99758 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 OR9M1P-201ENST00000459641 921 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 RPL23AP37-201ENST00000479658 549 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 RN7SL323P-201ENST00000494712 295 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AC026427.2-201ENST00000506228 536 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AC093815.1-201ENST00000508637 280 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 RNA5SP249-201ENST00000516127 99 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.48□□□□□ -1.53
ABCA3Q99758 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 AC103968.1-201ENST00000557841 573 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.48□□□□□ -1.53
ABCA3Q99758 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 AL356274.2-201ENST00000624379 3752 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 AP000432.2-201ENST00000624164 2048 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 NPM1P34-201ENST00000428821 893 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.48□□□□□ -1.53
ABCA3Q99758 AL451050.1-201ENST00000450126 415 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 RNU1-95P-201ENST00000516357 160 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 RNU1-128P-201ENST00000516704 160 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.48□□□□□ -1.53
ABCA3Q99758 HMGB2P1-201ENST00000591146 634 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 MIR6868-201ENST00000611215 58 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 AF001550.2-201ENST00000636643 217 ntBASIC5.48□□□□□ -1.53
ABCA3Q99758 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ABCA3Q99758 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ABCA3Q99758 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.47□□□□□ -1.53
ABCA3Q99758 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
ABCA3Q99758 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ABCA3Q99758 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 AL592291.1-201ENST00000403830 352 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 Z92545.1-201ENST00000411782 234 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCA3Q99758 AC092647.1-201ENST00000420654 287 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.47□□□□□ -1.53
ABCA3Q99758 AC090013.1-201ENST00000485147 480 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.47□□□□□ -1.53
ABCA3Q99758 HMGN1P15-201ENST00000513870 295 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 AC015726.1-201ENST00000602353 681 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 COX6CP4-201ENST00000605798 228 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 AC016957.2-201ENST00000616998 848 ntBASIC5.47□□□□□ -1.53
ABCA3Q99758 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ABCA3Q99758 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.47□□□□□ -1.53
ABCA3Q99758 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ABCA3Q99758 AL355596.1-201ENST00000565399 3996 ntBASIC5.46□□□□□ -1.53
ABCA3Q99758 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
ABCA3Q99758 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ABCA3Q99758 AC011755.1-201ENST00000623763 2049 ntBASIC5.46□□□□□ -1.53
ABCA3Q99758 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ABCA3Q99758 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.46□□□□□ -1.53
ABCA3Q99758 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.46□□□□□ -1.53
ABCA3Q99758 U1.1-201ENST00000384101 164 ntBASIC5.46□□□□□ -1.54
ABCA3Q99758 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCA3Q99758 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCA3Q99758 RPL29P14-201ENST00000495837 428 ntBASIC5.46□□□□□ -1.54
ABCA3Q99758 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.46□□□□□ -1.54
ABCA3Q99758 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCA3Q99758 AC087369.1-201ENST00000520775 996 ntBASIC5.46□□□□□ -1.54
ABCA3Q99758 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.46□□□□□ -1.54
ABCA3Q99758 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.46□□□□□ -1.54
ABCA3Q99758 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms