Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC112673.1-201ENST00000513168 575 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 snoZ278.1-201ENST00000517059 112 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP88Q99567 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP88Q99567 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 AC109454.4-201ENST00000623411 649 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 AC073869.7-201ENST00000640874 297 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 AL450345.1-202ENST00000605741 3881 ntBASIC5.94□□□□□ -1.46
NUP88Q99567 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP88Q99567 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NUP88Q99567 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NUP88Q99567 MTND4P10-201ENST00000446199 1363 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NUP88Q99567 RN7SKP115-201ENST00000363177 317 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 MIR513B-201ENST00000385136 84 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 SNORA48.4-201ENST00000391089 134 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AL590290.1-201ENST00000405336 380 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 GTF2IP5-201ENST00000414608 731 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 DPPA2P2-201ENST00000418220 897 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 C1DP1-201ENST00000426049 402 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 HSPD1P12-201ENST00000429127 1069 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AL161722.2-201ENST00000434731 981 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AP000936.3-201ENST00000438127 255 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 RPS26P30-201ENST00000443431 335 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 AL589880.1-201ENST00000448271 287 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 NPM1P13-201ENST00000452663 865 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC005410.1-202ENST00000460347 485 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 RPL23AP12-201ENST00000467573 473 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 RPL7P16-201ENST00000479738 738 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AL049874.2-201ENST00000492636 288 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC010627.1-201ENST00000503819 1294 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC097173.1-201ENST00000505862 819 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC026782.2-201ENST00000510845 636 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 CDH12P4-201ENST00000517835 295 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 CDH12P3-201ENST00000517935 295 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 CDH12P1-201ENST00000518435 295 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 HMGB1P23-201ENST00000518743 568 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC022360.1-201ENST00000521058 340 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 MTND2P38-201ENST00000522536 667 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 DEFB130C-202ENST00000530001 230 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC021006.3-201ENST00000530771 192 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 MTCO1P40-201ENST00000574371 625 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 CCDC58P3-201ENST00000590792 430 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC245036.5-201ENST00000596330 847 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 NIFKP6-201ENST00000598115 845 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 EIF1P6-201ENST00000600054 334 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 ELOCP35-201ENST00000604289 336 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 BNIP3P4-201ENST00000604946 565 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AL583856.2-201ENST00000606298 543 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NUP88Q99567 MIR7973-1-201ENST00000614683 76 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 ADAM5-202ENST00000399789 1942 ntBASIC5.93□□□□□ -1.46
NUP88Q99567 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP88Q99567 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NUP88Q99567 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP88Q99567 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP88Q99567 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP88Q99567 AL606537.1-201ENST00000607258 2011 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP88Q99567 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP88Q99567 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 SNORA56-201ENST00000383966 129 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 SNORA66-201ENST00000384792 133 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms