Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 RNY1P12-201ENST00000364251 105 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 RNA5SP510-201ENST00000364697 99 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 RN7SKP47-201ENST00000365347 328 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 Y_RNA.350-201ENST00000365409 98 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC004386.1-201ENST00000393214 761 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AL139397.2-201ENST00000404529 772 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 RN7SKP261-201ENST00000410948 278 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 GEMIN2P2-201ENST00000418195 715 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC006548.1-201ENST00000427470 102 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 RPS3AP54-201ENST00000435535 734 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 UBE2V1P5-201ENST00000440070 405 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC104332.1-201ENST00000440471 797 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 OR52I1-201ENST00000450052 1050 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 GSTA11P-201ENST00000452866 669 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 RNU6-566P-201ENST00000516790 107 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 MYL12AP1-201ENST00000518490 515 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 MIR4700-201ENST00000578311 74 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC012409.4-201ENST00000612923 249 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC130324.3-201ENST00000614165 542 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC091953.2-201ENST00000623979 160 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC091903.1-201ENST00000624322 454 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AL035555.1-201ENST00000404462 1790 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC006058.1-201ENST00000568686 5067 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 AC061975.7-201ENST00000592016 2692 ntBASIC7.63□□□□□ -1.19
LRCH3Q96II8 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LRCH3Q96II8 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
LRCH3Q96II8 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RNA5SP77-201ENST00000365394 120 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RNU6-746P-201ENST00000384112 109 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AL355375.1-201ENST00000405686 392 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AL137014.1-201ENST00000420490 1226 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 PIGPP3-201ENST00000425307 415 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC099782.1-201ENST00000425889 474 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RPL7P4-203ENST00000430239 730 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC119618.1-201ENST00000434191 222 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 FTH1P20-201ENST00000434913 548 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC023194.2-201ENST00000465398 406 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 RPL12P31-201ENST00000478433 450 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 RN7SL629P-201ENST00000489622 285 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms